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Release 2021-12-17

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@holtjma holtjma released this 17 Dec 15:21
· 39 commits to main since this release
2021-12-17
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Learn about vigilant mode.

Two main results changes:

  • Adds the dnascope-0.5-202010.04-PO variant caller: This is the same data as dnascope-0.5-202010.04 but with a PASS-only filter applied to the VCF file. The short-read DNAscope callers uses the FILTER field to annotate variants that are rejected by the model as likely false positives. This has significant impact on the results and is recommended as best practice by the developers. Thanks to @DonFreed for helping diagnose the issue!
  • Updates minimap2 aligner from v2.22 to v2.23: Overall, this had minimal impact in our benchmark. v2.22 will be retired from the benchmark next release.

Contributors

DonFreed
Assets 3
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