emuR 1.1.0

new features / performance tweaks / improvements

• URL encoding of bundle and session names to allow for URL string reserved characters in bundle and session names
• error message of get_trackdata() now contains seglist row index if "Can not extract following"
• normalize_length() now allows for additional non-numeric columns
• changed stop() to warning() in get_trackdata() when samplerates are inconsistent (closes #190)
• better error message when there is a naming mismatch of _emuDB dir _DBconfig.json
• using sub() instead of tools::file_path_sans_ext() to handle _ in file extensions
• query(), requery_seq() and requery_hier() now supports the resultType "tibble" (and get_trackdata(), requery_seq(), requery_hier() and serve() support them as input)
• serve() function now uses seglist$start and seglist$end instead of seglist$sample_start and seglist$sample_end
• implemented first version of update_itemsInLevel() (only label updates for now)
• now setting the sample_start and sample_end values in query results when EVENT levels are queried (previously only start was set)
• implemented first versions of create_links() (currently not checking for anything), create_itemsInLevel() (only EVENTs and ITEMs) and update_itemsInLevel() (only labels) and delete_itemsInLevel()
• list_bundles() outside of loop for performance bump in get_trackdata()
• better error message in add_files() if no files are found
• consistentOutputType of get_trackdata() is not set to TRUE and is reset to T if resultType is "emuRtrackdata" or "tibble" (fixes #203)
• avoiding negative times_rel and times_norm values in create_emuRtrackdata() by setting them to 0 (caused by string to numeric conversion precision errors)
• requery_seq() now inserts NA values for the out of bounds rows instead of dropping them.
• implemented list_sampleRates() function
• get_trackdata() is now iteratively appending to a list() instead of into a SQLite temp table. This is a fairly large performance boost and also fixes #206.
• added deprecation warnings to vignettes (added links to manual chapters)

bug fixes

• propper fix for "now ordering by items_idx not by start_start_seq_idx which led to bad label sequences (fixes #140)"
• fixed bad indexing in normalize_length() when sl_rowIdx values are not a c(1, 2, 3, 4, ...) sequence
• fixed staticContours SSFF tracks not being sent to EMU-webApp (fixes #195)
• fixed bug with completely empty levels that caused a bad resort of levels in _annot.jsons in rewrite_allAnnots()
• fixed bug in add_files() that was using the wrong variable (fixes #196)
• added error message when querying levels without time-bearing sub-levels (closes #150)
• fixed bug in create_emuRtrackdata() with handeling trackdata object of class spectral
• correct recalculation of ITEM IDs of missing levels in .hlb files (== only present in ESPS files) in convert_legacyEmuDB()
• fixed handling of completely empty levels in .hlb files
• normalize_length() now handles various additional column types (not just "numeric")