COMPASS v1.0.1

COMPASS core code 1.0.1

Version 1.0.1 aligns the uncertainty and testing-selection sensitivity analyses
with the strict focal-species leave-one-out probability layer used throughout
the revised manuscript.

Robustness update

• The profile-likelihood analysis propagates censored-record likelihood
  uncertainty for 24,254 identified protective model cells across 413 measured
  protective contexts.
• The MNAR analysis models direct-testing propensity without using the tail
  outcome as a predictor, applies inverse-probability weighting, and evaluates
  prespecified tail-positive testing odds ratios of 0.25, 0.5, 1, 2, and 4.
• The five national panel members remain unchanged throughout the tested MNAR
  range; rank-order changes are retained in the machine-readable output.
• SI Figure S6 is rebuilt from these strict-LOO outputs with editable SVG/PDF,
  300-dpi PNG, 600-dpi TIFF, source-data tables, and a figure contract.

Scope

These analyses quantify stated record-censoring uncertainty and sensitivity to
unidentifiable testing-selection assumptions. They leave the primary strict-LOO
probability matrix and national Top-5 unchanged and do not estimate unmeasured
absolute toxicity or replace formal SSD/HC5 assessment.

Data boundary

The repository contains source code, configuration, numerical contracts, tests,
and release metadata. It does not redistribute EPA ECOTOX or other third-party
raw, processed, or derived analysis datasets. Those sources must be obtained
from their official providers and prepared to the documented input contracts.

No archival DOI is claimed for this release.

COMPASS R1 reproducibility release v1.0.0

COMPASS R1 reproducibility release

This is the versioned code release supporting the R1 revision of “Developing
Complementary Aquatic Sentinel Panels for Cross-Chemical Monitoring and Regional
Localization.”

Scope

• Base COMPASS analysis code, semantic stages 01–22
• Ordered R1 AP01/AP02/AP05/AP03A/AP03B/AP04/G3 revision analyses
• Frozen R1 strict-LOO values and numerical validation contracts
• Main-figure source and the publication-ready SI Figure S8/Table S7 builders
• Input/data-source contracts and an R1-specific static Explorer exporter

Data boundary

Primary inputs include large public and provider-hosted resources such as EPA ECOTOX. They are available from their official services and are not mirrored in this compact code release because of their size and provider distribution arrangements. Follow the official links and preparation contracts in data/README.md.

Reproducibility status

The tagged source state passed the data-free unit/assertion suite, Python compile
check, R1 numerical validation, public-source audit, site-data cross-check, and
tracked-file checksum verification. See docs/release_validation_report.md and
release/checksums.sha256 for the machine-readable evidence.

The Git tag and commit identify this release. No archival DOI is claimed unless
and until a separate archive returns a verified identifier.