MMVmalaria 1.2.0
This MMVmalaria release is the final release before migration of MMVverse packages to R 4.4.1 (from R 3.6.3). This release is intended to capture changes made to MMVmalaria (and MMVbase) between the previous releases and the subsequent release post-migration. This version of MMVmalaria has not been extensively tested, and it is adviced to use the previous release (1.1.0) for conducting activities in R 3.6.3.
Removed functions
- adjust_Dose
- get_IQRdistribution
- convert_catCovToTxt
- generate_ActivityContent
- generate_ActivityResults
- generate_DuplicatedActivityReport
- generate_MissingActivityReport
- get_ActivityInfo
- get_ActivityList
- cbindMMV
- rbindMMV
- combMMV
- libraryMMV
- reverse_List
Functions migrated to MMVbase
- MMVggplot
- transform_IQRggplotToMMVggplot
- get_ActivityPath
- adjust_ggplotTheme
- summarizeReplicates
- swapName_MMVnameToName
- swapName_NameToMMVname
- transform_dataFrame_LongtoWide
- transform_dataFrame_WidetoLong
- Check_MissingDatabyNAME
- IQRtableToDataFrame
- aux_CommonSubPath
- aux_createUSUBJID
- aux_removeEscapeChar
- check_dataGeneralMMV
- check_dataGeneralMMV_Center
- clopperPearsonMMV
- collapseMMV
- convert_Unit
- create_PKPDsimtime
- file.copyMMV
- find_MinMMV
- is.fileMMV
- getDoselevel
- get_IXGDFtoRemove
- get_fileNameExtension
- newtonRaphson.Function
- newtonRaphson.Vector
- summarize_PIandCIgeneric
- summaryAcrossTrials
- summaryByTrial
- Load_Rdata
Functions migrated to MMVworkflows
- check_ActivityInfo
- check_ActivityResults
- create_RprofileMMV
- generate_OverviewFile
- list_ActivityType
- list_Center
- list_GenericType
- saveActivityInfo
- set_MMVsettings
DESCRIPTION tidying
- IQRtools moved to Imports (from Depends)
- MMVbase Imports MMVbase (== 1.1.0) (previously no version)