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v0.2.0

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@GallVp GallVp released this 20 May 22:58
· 5 commits to main since this release
v0.2.0
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What's Changed

Added

  1. Added parameters max-cpu-factor, max-mem-factor to match the user experience provided by nf-float
  2. Added --customTag so that the jobs are bundled into a workflow on MM Cloud OpCentre
  3. Added container-init-snakemake-fsx-efs.sh for container initialization on MM Cloud OpCentre

Fixed

  1. Removed a match statement from float_utils.py to support Python 3.9
  2. Fixed an issue where job memory was not correctly assigned if the pipeline specified mem_gb instead of mem_mib
  3. Fixed an issue where job submission failed due to very low memory requirement compared to the number of required vCPUs
  4. Fixed an issue where --conda-prefix was ignored and /memverge/.snakemake was force specified as the prefix

Deprecated

  1. data-volumes is no longer a required parameter.

Dependencies

  1. Snakemake==7
  2. Python>=3.9

PRs

  • Added max-cpu-factor, max-mem-factor and --customTag by @GallVp in #1

New Contributors

  • @GallVp made their first contribution in #1

Full Changelog: v0.1.0...v0.2.0

Contributors

GallVp
Assets 2
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