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Add unified CXR runner and fix observation window#27

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joshuxchn merged 2 commits into
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jc/cxr
May 27, 2026
Merged

Add unified CXR runner and fix observation window#27
joshuxchn merged 2 commits into
mainfrom
jc/cxr

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Changes made prior to paper submission

  • Added end-to-end experiment script for MIMIC-IV + MIMIC-CXR mortality prediction
    supporting 6 models with configurable observation windows. Extension of Rian's unified script
  • Fixed observation window to skip admissions that start at or after effective_end to prevent a Polars Overflow error (negative integer window)

Tests:

  • Ran BT, EHRMamba, JambaEHR with 24hr and 48hr windows, results in paper
image

@joshuxchn joshuxchn requested review from Rian354 and will-pang April 24, 2026 01:54
@joshuxchn joshuxchn merged commit 2ffea32 into main May 27, 2026
@will-pang will-pang deleted the jc/cxr branch June 3, 2026 08:17
@will-pang will-pang restored the jc/cxr branch June 3, 2026 08:18
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