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@TorecLuik TorecLuik released this 07 Jul 15:11
v1.5.0
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OMERO.biomero v1.5.0

Major frontend release adding Bilayers workflow support and the new Web Uploader, with improvements to workflow configuration, attachment handling, and administration.

What's Changed

  • 🧬 Bilayers Workflow Support

    • Added frontend support for Bilayers workflow descriptors alongside BIAFLOWS
    • Workflows can now define richer I/O, including non-image inputs such as OMERO attachments
    • Added UI support for selecting workflow input attachments based on the required file types
    • Added support for direct descriptor file URLs in addition to workflow repository URLs
    • Improved workflow metadata handling and descriptor-based configuration

  • 📤 Web Uploader

    • Added a new uploader tab integrated with BIOMERO.importer
    • Enables browser-based drag-and-drop uploads
    • Added support for resumable/chunked uploads
    • Added improved upload destination handling, including group folder support
    • Added clearer upload warnings and permission feedback

  • ⚙️ Workflow and Admin Improvements

    • Improved workflow configuration dialogs and UI feedback
    • Added support for global workflow settings in addition to per-workflow settings
    • Improved handling and display of workflow descriptor mismatches and configuration warnings
    • Added improved group mapping administration with a tree-based selector
    • Improved attachment browsing and selection workflows

  • 🌐 File and Data Handling Improvements

    • Added improved browsing support for Zarr files and Zarr plates
    • Added support for additional file/container formats (including Leica datasets and ICArch files)
    • Improved import warnings for files requiring conversion to avoid unexpected data duplication

Key Improvements

  • Expanded workflow support beyond image-only inputs
  • Added a simple browser-based upload workflow through BIOMERO.importer
  • Improved safety around group-based uploads and permissions
  • Improved workflow configuration and administration experience

Compatibility

  • Requires BIOMERO.analyzer & BIOMERO.scripts v2.8.0 or later for Bilayers workflows and config settings support

Full Changelog: v1.4.0...v1.5.0

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