Evo2#694
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…ing, default 0 for topk/topp.
… debt in tokenizer and config, remove unused args in infer.py.
…d add transcript splicing script for preprocessing.
…ate test to use new checkpoint
Signed-off-by: John St John <jstjohn@nvidia.com>
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… different submodules Signed-off-by: John St John <jstjohn@nvidia.com>
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weird issue with duplicated pycaches. I think I have a fix for it that I added to run_pytest.sh. |
Signed-off-by: John St John <jstjohn@nvidia.com>
Signed-off-by: John St John <jstjohn@nvidia.com>
Signed-off-by: John St John <jstjohn@nvidia.com>
dorotat-nv
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Mar 5, 2025
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left a few comments but LGTM
…operly Signed-off-by: John St John <jstjohn@nvidia.com>
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Description
This provides an implementation of Evo2 supporting pre-training, fine-tuning and preprocessing of data for Evo2 from fasta files. This makes use of the new Hyena/Evo2 model support in NVIDIA-NeMo/NeMo#12263.
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