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whirl 0.3.0

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@akselthomsen akselthomsen released this 08 Jul 13:22
· 25 commits to main since this release
v0.3.0
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Learn about vigilant mode.
  • Add write_biocompute() to create BioCompute Objects containing the logs in a standardized JSON format.
  • Calling run() with track_files = TRUE now checks if strace can be attached to the process.
  • Improved json logs and similar returned output from running a script (result column in return from run()).
  • Simplified approved packages check. Now the user supplies a character vector of packages and versions specified as {package}@{version}.
  • Implement use of tag in the returned output. Each script is now tagged with the step name in the summary report.
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