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Releases: OpenFreeEnergy/pdbinf

v0.0.7 - Information guessing features

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@richardjgowers richardjgowers released this 20 Sep 09:18

Adds the guessing module.

This allows the residue name (guessing.guess_residue_name) and atom names (guessing.guess_atom_names) to be guessed from nonstandard inputs.

Full Changelog: v0.0.6...v0.0.7

v0.0.6 - Slightly nonstandard stuff allowed

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@richardjgowers richardjgowers released this 10 Aug 10:28

PDBInf strictly relies on the names assigned to residues and atoms. This release includes the list of synonyms/aliases from OpenMM's PDBFile reader to allow multiple possible names for residues and atoms within a residue. For example a NME residue with carbon atoms called "CH3" (canonical is "C") is now properly treated.

v0.0.5 - allow chain breaks

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@richardjgowers richardjgowers released this 07 Aug 10:57

Allows chain breaks in inputs, previously this raised a ValueError

v0.0.4

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@richardjgowers richardjgowers released this 21 Mar 17:38

DNA and RNA support

v0.0.2

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@richardjgowers richardjgowers released this 14 Feb 17:25

Full Changelog: v0.0.1...v0.0.2

v0.0.1

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@richardjgowers richardjgowers released this 02 Feb 15:23