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pgsc_calc v1.2.0

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@nebfield nebfield released this 19 Oct 09:11
· 414 commits to main since this release
v1.2.0
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Learn about vigilant mode.

This release is focused on improving memory and storage usage.

Features

  • Allow genotype dosages to be imported from VCF to be specified in vcf_genotype_field of samplesheet (default: GT / hard calls)
  • Makes use of durable caching when relabelling and recoding target genomes (--genotypes_cache)
  • Improvements to use less storage space:
    • All intermediate files are now compressed by default
    • Add parameter to support zstd compressed input files
  • Improved memory usage when matching variants

(updated tagged release to fix docs)

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