Multi-Task Omics

Landing site for Multi-Task Omics — an ecosystem of methods for multimodal, multibatch, multi-condition single-cell analysis.

Live site: https://pyanglab.github.io/MultiTaskOmics/

The ecosystem

Tool	What it does	Docs
M3	Condition-aware deep factor learning: multimodal integration, patient-level inference, multi-resolution interpretation	https://pyanglab.github.io/M3/
scMultiBench	Benchmarking of single-cell multimodal integration methods with scIB metrics	in preparation
Matilda	One multi-task network — classification, dimension reduction, feature selection, simulation	https://pyanglab.github.io/Matilda/

Project structure

.
├── docs/
│   ├── index.md            # Landing page (portal)
│   ├── methods.md          # "Which tool do I need?" guide
│   ├── assets/             # Logos and images
│   ├── javascripts/        # Hero sphere + scroll animations
│   ├── stylesheets/        # extra.css (theme overrides)
│   └── includes/           # Abbreviations snippet
├── overrides/              # Custom Material theme templates
│   ├── home.html           # Full-width landing template
│   └── 404.html            # Custom 404 page
├── mkdocs.yml              # Site configuration
├── requirements.txt        # Python dependencies
└── .github/workflows/      # GitHub Actions (build + deploy)

License

Released under the MIT License.