PangTreeGUI 2.0

Poagraph ver2 (#3)

* New graph layout

* Graph drawing optimization

* Poagraph callback refactor

* Poagraph component refactor

* Poagraph start-bug fixed

* Use consensus in graph

* Poagraph style

* Debug mode: off

* Highlight sequence

* Poagraph colors update

* Affinity tree to filter sequences in poagraph

* Code and style refactor

* Temporary fix - affinity tree

* Fix

* Replace scatter grapg with sankey diagram

* Diagram range start

* Fix gap graph

* Fix zoom=1

* Remove dash-cytoscape

* Fix poagraph range-end

* Remove unused code: mafgraph

* Configure server

* Add poagraph-slider

* Temporary weak connections removal

* Fix bounding vertices

* Fix removal of weak edges

* Fix poagraph diagram filter algorithm

* Poagraph checklist

* Improve weak-connections algorithm

* Finish weak-connections algorithm

* Filter sequences using Affinity Tree

* Highlight sequence algorithm

* First version of poagraph descriptions

* Extreame zoom-out

* Fix sequence higlight

* Update green rectangle

* Gap shape fix

* Add SNP removal

* Update weak threshold description

* Add Procfile for heroku

* Update requirements

* Fix heroku problem

* Graph slider

* Tooltips

* Scale Affinity Tree positions

* Show selected tree node

* Fix sequence highlighting

* Scale Afiinity Tree slider

* Refactor consensus tree callbacks

* Poagraph refactor

* Add loading poagraph

* Pangtreebuild form loading

* Add tooltip text

* Remove line from Affinity Tree

Co-authored-by: paulina.knut <paulina.knut@codilime.com>

PangTree 1.0

v1.0

Update setup.py