DigitalSoma v2.2.0
DigitalSoma v2.2.0
Author: Dr. ir. Ali Youssef
ORCID: 0000-0002-9986-5324
Affiliation: Computational Bio-Ecosystems, Digital Agroecosystems Laboratory,
University of Manitoba & BioTwinRs Ltd., Winnipeg, Canada
Install
pip install digitalsoma
What's in this release
- Physics-based five-layer digital twin for animal physiology
- 6 ATR species: porcine, equine, bovine, ovine, canine, salmonid
- 6 built-in physiological solvers (Fick, Kleiber+Q10, Newton, RQ, HPA, VeDDRA)
- HL7 FHIR R4 integration — to_fhir_bundle(), from_fhir_bundle(), FHIRMapper
- 30 canonical properties mapped to LOINC + SNOMED CT + UCUM
- VeDDRA v2.2 adverse event screen — EMA EVVET3 / UK VMD / FDA-CVM
- 11 OpenAI-compatible LLM tool schemas
- PyPI packaging — pyproject.toml, MANIFEST.in, py.typed
- 36 FHIR tests, full documentation, porcine clinical simulation
- Zero runtime dependencies · Python ≥ 3.9 · CC BY 4.0