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DigitalSoma v3.0.0 — Species-aware VeDDRA engine

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@Pierianspring Pierianspring released this 12 Apr 11:42

What's new in v3.0.0

Major — VeDDRA overhaul

  • New subpackage digitalsoma/veddra/ with official EMA Rev.16 term vocabulary
  • Species-aware adverse event screen: 4 to 13 rules per species, replacing the flat 6-rule universal list
  • Corrected VeDDRA codes: all codes now use official EMA Rev.16 PT-level integers; v2.x codes were incorrect

Fixes

  • spo2_pct URI corrected (SNOMED 103228002 — was wrongly using a LOINC code)
  • ambient_temp_C and skin_temp_C now have distinct URIs
  • rmr_W and rmr_kcal_day now have distinct URIs
  • FHIR Observation categories are correct across all 21 properties
  • LOINC codes added for vco2_L_min and rmr_kcal_day with reverse map entries
  • soma_agent.py docstring corrected to match actual tool schemas

Licence change

CC BY 4.0 → CC BY-NC-SA 4.0 (non-commercial, ShareAlike)

Documentation

Full technical documentation

Install: pip install digitalsoma==3.0.0