MANTA (Modular Analysis from N-dimensional Transcriptome Alignment) is a next-generation Python framework for the alignment, reconstruction and downstream analysis of transcriptome data across all spatial and temporal dimensions.
In order to use MANTA, make sure you have a valid CUDA installation (12 or higher, verify using nvcc --version) and Conda available on your system.
- Create a Conda environment using
conda create --name myenv --file manta.yml