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MONAI-Physio 2026.09.1

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@aylward aylward released this 22 Sep 20:22
· 6 commits to main since this release
6822e3e

New

  • SegmentNVSegmentCT: new segmentation class using NV-Segment-CT, with pretrained weights support (#144)
  • registrar() / segmenter() factory methods on tutorial parameter classes — anatomy-tuned registrar/segmenter without hand-building RegisterImagesGreedy/segmenter instances (#145)
  • tutorial_00_lung_demo.ipynb: self-contained lung-motion demo, downloads Chest-CT + pretrained PhysicsNeMo-MGN-Lung-Motion checkpoint, runs end-to-end with no prior tutorial dependency

Fixed

  • workflow_convert_vtk_to_usd.py: mesh-path lookup now uses sanitized data_basename instead of raw usd_project_name
  • Tutorial 3 doc: stale RegisterImagesGreedy() snippet corrected
  • Lung tutorials 01–13 updated to use new factories; various fixes accompanying NV-Segment-CT integration
  • pyproject.toml: dropped two dangling mypy overrides for removed tutorial_08/09_lung_all files

Docs

  • Migration guide for 2026.09.0 API changes
  • Tutorial 00 documented in docs/index.rst, docs/tutorials.rst, tutorials/README.md

Other

  • Added restrict_deformation_field_to_normal_falloff_outside_mask for cardiac/respiratory slip-interface handling (Tutorial 13)

Notes

  • migration_next.md empty for this cycle — no breaking API changes since 2026.09.0.
  • This release was used for the Pre-MICCAI hands-on workshop.

What's Changed

  • ENH: NV-Segment-CT, pretrained weights, lung tutorial fixes by @aylward in #144
  • ENH: registrar/segmenter factories, Tutorial 00 by @aylward in #145
  • ENH: Release 2026.09.1 by @aylward in #146

Full Changelog: 2026.09.0...2026.09.1