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PhysioTwin4D 2026.07.1

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@aylward aylward released this 07 Jul 18:44
· 40 commits to main since this release
2026.07.1
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Learn about vigilant mode.

This is a documentation- and metadata-only patch release. No public API,
workflow, or CLI behavior changed.

Highlights

  • Reframed the project description everywhere (README, pyproject.toml,
    package docstring, CLAUDE.md, AGENTS.md, Sphinx docs) around what
    PhysioTwin4D actually is: methods, workflows, tutorials, and a CLI for
    building personalized physiological digital twins — anatomic models plus
    AI surrogates, starting with cardiac/respiratory motion and expanding to
    electrophysiology, blood flow, and organ perfusion.
  • Simplified README.md into a highlights page that points to the hosted
    docs site (https://project-monai.github.io/physiotwin4d/) instead of
    duplicating installation/CLI/API content inline.
  • Consolidated docs/examples.rst into docs/tutorials.rst: tutorials are now
    the single source of runnable usage examples, each with an "Inner API
    usage" excerpt from the real tutorial script and an input/output preview
    (placeholder GIFs for now, tracked via Git LFS).
  • Updated docs/architecture.rst to reflect the current class set (Greedy /
    Greedy+ICON registration, WorkflowFineTuneICONRegistration,
    SegmentChestTotalSegmentatorWithContrast, and others), the PhysicsNeMo
    AI-surrogate tutorial pipeline, and the accurate CLI command list.
  • Removed stale docs (changelog.rst, PYPI_RELEASE_GUIDE.md) and fixed the
    docs CI workflow to fetch Git LFS assets before building, so tutorial
    preview images publish correctly.
  • Refreshed statistics.md with current repo metrics.

No dependency, API, or CLI changes in this release.

What's Changed

  • BUG: Avoid name collision when building docs on CI by @aylward in #73
  • BUG: Nightly CI runner python accessed via py by @aylward in #75
  • Eliminate tubetk by @aylward in #76
  • ENH: Provide TotalSegmentatorWithContrast as a custom seg option by @aylward in #77
  • ENH: Provides volumetric meshing. by @aylward in #78
  • Rename/physiotwin4d by @aylward in #79
  • ENH: Cleaned up infrastructure and documentation by @aylward in #80
  • ENH: Release 2026.07.1 by @aylward in #81

Full Changelog: 2026.07.0...2026.07.1

Contributors

aylward
Assets 7
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