Expand wiki to 4 sibling sub-wikis + move reading-queue#1
Merged
Conversation
Adds sibling sub-wikis (smbh_wiki, cti_wiki, methods_wiki, galaxies_wiki) covering ~422 papers across the remaining PDF folders that the initial lensing_wiki build left out (SMBHs, CTI, Euclid, MassiveEllPaper, Bulge_Disk_Decomp, LightProFFits, IFUs, Manga, COSMOS, StellarHalos, High_Redshift_galaxies, Dark_Matter_Geometry, Stats, GaussianLinearModels, PPLs, Deep Learning, Software, Simulation, AndrewSuggests, UnRead, SpiralsMorph, Collaborations, GWB, Medical, and root-level singletons). Each sub-wiki inherits the schema from lensing_wiki/CLAUDE.md and contains: CLAUDE.md, index.md, log.md, seed concepts/entities, and filename-inferred status: stub source pages. lensing_wiki itself is extended with new pages (pyautolens-papers, frb-lenses, weak-lensing, wdm-and-lya, reviews-and-summaries) and additions to existing source pages (cluster-lensing, dark-matter-substructure, gr-cosmology, interferometric-lensing). Top-level changes: - new index.md mapping the multi-wiki layout. - README.md rewritten to describe the new layout and the post-deletion archival role of the File: paths in stubs. - reading-queue.md added (moved from admin_jammy/papers.md) so PyAutoPaper becomes the unified paper-management repo. - 9 .bib bibliography files at the repo root now tracked. - All in-repo PDFs removed (~620 files, ~30 folders) after off-repo backup confirmation; gitignored anyway so no actual deletion is in this diff. The remaining non-PDF reference files (Hubble1926.321H, devaucoleurs1948.247D, CTI/Hall1952Theory, DarkMatterModels/Navarro1996…, LightProFFits/devVaucoleuris1948pdf, Euclid/Paykari2020.bib, Medical/Liu2024CUPRCT.htm) are preserved and tracked. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
lensing_wiki/:smbh_wiki/,cti_wiki/,methods_wiki/,galaxies_wiki/. Each inherits the schema fromlensing_wiki/CLAUDE.mdand contains its ownCLAUDE.md,index.md,log.md, seed concept / entity pages, and filename-inferred source-collection pages covering ~422 papers from the folders the initial wiki build left out (SMBHs, CTI, Euclid, MASSIVE-survey ETGs, IFU surveys, COSMOS, Bayesian-inference methods, samplers, simulations, etc.).lensing_wiki/with new source pages (pyautolens-papers,frb-lenses,weak-lensing,wdm-and-lya,reviews-and-summaries) and additions tocluster-lensing,dark-matter-substructure,gr-cosmology,interferometric-lensing.PyAutoPaper/index.md(top-level map across all sub-wikis) andPyAutoPaper/reading-queue.md(moved fromadmin_jammy/papers.md), making PyAutoPaper the unified paper-management repo.README.mdrewritten to describe the new multi-wiki layout..bibbibliography files now tracked (cooper, library, library2, library_jam, libraryipft, manual, pyautofit, pyautolens, qiuhan).File:line in every source stub is the archival anchor for restore. Preserved non-PDF reference files (Hubble1926.321H,devaucoleurs1948.247D,CTI/Hall1952Theory,DarkMatterModels/Navarro1996StructureCDMHalos.563N,LightProFFits/devVaucoleuris1948pdf,Euclid/Paykari2020.bib,Medical/Liu2024CUPRCT.htm) are tracked.status: stub(filename-inferred, unread) — same convention as the initial 193-paper build. See each sub-wiki'slog.mdfor scope.Companion PR in
admin_jammy: removespapers.mdand pointsREADME.md/claude.mdat the new location.Companion change in
PyAutoPrompt: smallREADME.mdupdate (committed directly tomainsince it's only 2 lines listing PyAutoPaper in the repo map).Test plan
PyAutoPaper/index.mdand follow links into each sub-wiki'sindex.md.[[wiki-links]]per sub-wiki resolve (forward-refs to unwritten pages are expected and OK).reading-queue.mdcontent matches the previousadmin_jammy/papers.md.find PyAutoPaper -name "*.pdf" | wc -lreturns 0.🤖 Generated with Claude Code