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lengths

Simon Hegele edited this page May 26, 2025 · 3 revisions
usage: lengths [-h] [-c] [-s] [-p] [-t] files [files ...]

Basic read length distribution analysis.

positional arguments:
  files            FASTA/FASTQ-file(s)

options:
  -h, --help       show this help message and exit
  -c , --colors    Hexcodes for plotting
  -s , --scale     y-axis scale plots [default: linear]
  -p , --prefix    prefix for output-files [default: ssfsbt.lengths]
  -t , --threads   number of parallel threads to use for counting [default: 1]

Example plot

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