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Remove scipy upper bound for streaming extractors #3023

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Merged
samuelgarcia merged 3 commits into from
Jun 18, 2024
Merged

Remove scipy upper bound for streaming extractors #3023

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a891045
remove upper bound in scipy
h-mayorquin Jun 12, 2024
58cfcc4
update ibllib
h-mayorquin Jun 12, 2024
609cd34
update the other ibl
h-mayorquin Jun 13, 2024
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8 changes: 3 additions & 5 deletions pyproject.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -65,18 +65,16 @@ extractors = [
"pyedflib>=0.1.30",
"sonpy;python_version<'3.10'",
"lxml", # lxml for neuroscope
"scipy<1.13",
"scipy",
"ONE-api>=2.7.0", # alf sorter and streaming IBL
"ibllib>=2.32.5", # streaming IBL
"ibllib>=2.36.0", # streaming IBL
"pymatreader>=0.0.32", # For cell explorer matlab files
"zugbruecke>=0.2; sys_platform!='win32'", # For plexon2
]

streaming_extractors = [
"ONE-api>=2.7.0", # alf sorter and streaming IBL
"ibllib>=2.32.5", # streaming IBL
"scipy<1.13", # ibl has a dependency on scipy but it does not have an upper bound
# Remove this once https://github.com/int-brain-lab/ibllib/issues/753
"ibllib>=2.36.0", # streaming IBL
# Following dependencies are for streaming with nwb files
"pynwb>=2.6.0",
"fsspec",
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