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allow UnitWaveformsWidget to use probeinterface plot_probe #3819

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Merged
merged 6 commits into from
May 6, 2025
Merged

allow UnitWaveformsWidget to use probeinterface plot_probe #3819

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ee08f5a
allow UnitWaveformsWidget to use probeinterface plot_probe
jakeswann1 Mar 29, 2025
aa4c792
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 29, 2025
cab6857
Update to use Sam's probeinterface refactoring suggestion
jakeswann1 Apr 1, 2025
8491e73
Merge branch 'main' into dev
jakeswann1 Apr 1, 2025
de47f63
Use create_probe_polygon for probeinterface v>=0.2.27
alejoe91 May 5, 2025
38801b6
Update probeinterface version
alejoe91 May 5, 2025
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19 changes: 16 additions & 3 deletions src/spikeinterface/widgets/unit_waveforms.py
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Original file line number Diff line number Diff line change
@@ -1,7 +1,8 @@
from __future__ import annotations

import numpy as np
from packaging.version import parse
from warnings import warn
import numpy as np

from .base import BaseWidget, to_attr
from .utils import get_unit_colors
Expand Down Expand Up @@ -383,8 +384,20 @@ def plot_matplotlib(self, data_plot, **backend_kwargs):

# plot channels
if dp.plot_channels:
# TODO enhance this
ax.scatter(dp.channel_locations[:, 0], dp.channel_locations[:, 1], color="k")
from probeinterface import __version__ as pi_version

if parse(pi_version) >= parse("0.2.28"):
from probeinterface.plotting import create_probe_polygons

probe = dp.sorting_analyzer_or_templates.get_probe()
contacts, _ = create_probe_polygons(probe, contacts_colors="w")
ax.add_collection(contacts)
else:
ax.scatter(dp.channel_locations[:, 0], dp.channel_locations[:, 1], color="k")

# Apply axis_equal setting
if dp.axis_equal:
ax.set_aspect("equal")

if dp.same_axis and dp.plot_legend:
if hasattr(self, "legend") and self.legend is not None:
Expand Down