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dsh-chem

Deterministic chemistry math for DeepSeek Harness (dsh) — zero runtime dependencies, pure arithmetic over IUPAC data.

中文简介:化学计量数学工具箱。四个零依赖确定性工具——化学式解析与摩尔质量(支持嵌套括号、结晶水、离子电荷)、质量/摩尔/粒子数换算、溶液浓度(摩尔浓度、稀释 C1V1=C2V2、百分比浓度)、pH/pOH 与缓冲溶液。专门替代 LLM 高频出错的化学心算。

Why this plugin

Agents get chemistry arithmetic wrong in predictable ways:

  • Molar-mass sums — miscounted subscripts, dropped hydrates (CuSO4·5H2O is 249.68 g/mol, not 159.61).
  • Element case sensitivity — "Co" is cobalt (58.93), "CO" is carbon monoxide (28.01).
  • Dilution math — C1V1 = C2V2 with a wrong or missing factor.
  • pH log/antilog arithmetic — pH of 0.01 M HCl is 2, not 12.

These tools replace all of it with deterministic tables and formulas. No network, no state, no dependencies — install and call.

Tools

formula_mass — parse a formula and compute molar mass

Accepts nested parentheses, hydrate dots (CuSO4·5H2O, * also works), leading coefficients (2H2O) and ionic charges. Uses IUPAC standard atomic weights; elements without stable isotopes use the most-stable-isotope mass number (flagged with usedMassNumber).

{ "formula": "H2SO4" }
{
  "valid": true,
  "formula": "H2SO4",
  "molarMass": 98.072,
  "elements": [
    { "symbol": "H", "name": "Hydrogen", "count": 2, "atomicMass": 1.008, "massContribution": 2.016, "massFraction": 0.02056 },
    { "symbol": "O", "name": "Oxygen", "count": 4, "atomicMass": 15.999, "massContribution": 63.996, "massFraction": 0.65254 },
    { "symbol": "S", "name": "Sulfur", "count": 1, "atomicMass": 32.06, "massContribution": 32.06, "massFraction": 0.32690 }
  ],
  "usedMassNumber": false
}

Charge disambiguation rule (documented, deterministic): digits immediately before a trailing +/- belong to the ionic charge only when every element parsed so far is the same single element — Fe3+ is Fe with 3+, S2- is S with 2-, Ca2+ is Ca with 2+. Otherwise they are a subscript and the bare sign is a 1-unit charge — NH4+ is N + H4 with +, NO3- is N + O3 with -. The explicit form SO4^2- is always the charge, and O2^+ escapes the rule for subscript-before-charge. Single lowercase symbols are auto-corrected (h2o → H2O); multi-letter lowercase runs are rejected with a case-sensitivity hint.

mass_moles — mass / amount / particle conversions

Six modes (mass_to_moles, moles_to_mass, mass_to_particles, particles_to_mass, moles_to_particles, particles_to_moles), molar mass from a formula or given directly, Avogadro constant 6.02214076e23.

{ "mode": "mass_to_moles", "value": 98, "formula": "H2SO4" }
{ "valid": true, "mode": "mass_to_moles", "molarMass": 98.072, "avogadro": 6.02214076e+23, "formula": "H2SO4", "moles": 0.9992658455012644 }

solution — concentration math

Four operations:

  • molarity — mass of solute + volume → mol/L: { "operation": "molarity", "massG": 58.44, "volumeMl": 250, "formula": "NaCl" }molarity: 4
  • prepare — target molarity + volume → solute mass: { "operation": "prepare", "molarity": 0.1, "volumeMl": 500, "formula": "NaOH" }massG: 1.99985
  • dilute — C1V1 = C2V2, give any three of c1/v1/c2/v2 (M, mL) and the missing one is computed: { "operation": "dilute", "c1": 2, "c2": 0.5, "v2": 250 }v1: 62.5, solved: "v1"
  • percentwv (g per 100 mL), vv (mL per 100 mL) or mass percent: { "operation": "percent", "percentType": "wv", "soluteG": 5, "solutionMl": 200 }percent: 2.5

ph — pH chemistry at 25 °C (Kw = 1e-14)

Five operations:

  • from_h{ "operation": "from_h", "hConc": 0.001 }pH: 3, pOH: 11, ohConc: 1e-11
  • from_oh — [OH-] → pH/pOH
  • from_ph — pH → [H+]
  • from_poh — pOH → [OH-]
  • buffer — Henderson–Hasselbalch: { "operation": "buffer", "pKa": 4.76, "acidConc": 0.2, "baseConc": 0.1 }pH: 4.4589700043360185, bufferRatio: 0.5

Negative pH for >1 M acids is supported ([H+] = 2 → pH −0.301).

Install

dsh plugin --profile <profile> add github:TYEclipse/dsh-chem

(Requires pnpm on PATH — dsh plugin forwards installs to it.)

Verify

dsh plugin --profile <profile> list      # dsh-chem present
dsh --dump-config --profile <profile>    # == dsh-chem layer present

Development

pnpm install
pnpm build     # tsc -> dist/ (committed; git installs do not build)
pnpm test      # vitest, 102 tests
pnpm lint      # oxlint src test

All numeric anchors are generated by the independent Python oracle test/anchors-chem.py (own periodic table + own tokenizer) and cross-validated against published textbook molar masses (H2O 18.015, H2SO4 98.08, NaCl 58.44, Ca(OH)2 74.09, CuSO4·5H2O 249.68, C6H12O6 180.16, KMnO4 158.03, NH3 17.03).

License

MIT

About

Deterministic chemistry math for DeepSeek Harness: formula parsing + molar mass, mass/mole/particle conversions, solution concentration and pH math — zero runtime dependencies

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