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Sequence Aligner v1.0 (Windows app)

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@TomAs-1226 TomAs-1226 released this 01 Jul 15:00

A tunable DNA and protein sequence aligner as a native Windows app.

How to run

  1. Download SequenceAlignerApp-win-x64.zip below.
  2. Unzip it.
  3. Run SequenceAlignerApp.exe.

It is self-contained, so you do not need to install .NET or anything else. The 3D viewer and the AI structure feature need an internet connection.

What it does

Global, local, and semi-global alignment; linear or affine gaps; DNA or protein (BLOSUM62 / PAM250); whole-genome alignment with a banded method; a colored alignment view with readouts; a 3D structure viewer; and an AI secondary-structure predictor that runs on the GPU or NPU.