Revert dependencies on FillArrays #2042
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devmotion
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Jul 18, 2023
Pull Request Test Coverage Report for Build 5586219718
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## master #2042 +/- ##
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Coverage 0.00% 0.00%
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Files 22 22
Lines 1450 1450
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yebai
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Jul 27, 2023
* CompatHelper: bump compat for Bijectors to 0.13, (keep existing compat) * Update Project.toml * Replacement for #2039 (#2040) * Fix testset for external samplers * Update abstractmcmc.jl * Update test/contrib/inference/abstractmcmc.jl Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> * Update test/contrib/inference/abstractmcmc.jl Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> * Update FillArrays compat to 1.4.1 (#2035) * Update FillArrays compat to 1.4.0 * Update test compat * Try to enable ReverseDiff tests * Update Project.toml * Update Project.toml * Bump version * Revert dependencies on FillArrays (#2042) * Update Project.toml * Update Project.toml * Fix redundant definition of `getstats` (#2044) * Fix redundant definition of `getstats` * Update Inference.jl * Revert "Update Inference.jl" This reverts commit e4f51c2. * Bump version --------- Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com> * Transfer some test utility function into DynamicPPL (#2049) * Update OptimInterface.jl * Only run optimisation tests in numerical stage. * fix function lookup after moving functions --------- Co-authored-by: Xianda Sun <sunxdt@gmail.com> * Move Optim support to extension (#2051) * Move Optim support to extension * More imports * Update Project.toml --------- Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com> --------- Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org> Co-authored-by: haris organtzidis <organtzh@gmail.com> Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> Co-authored-by: David Widmann <devmotion@users.noreply.github.com> Co-authored-by: Xianda Sun <sunxdt@gmail.com> Co-authored-by: Cameron Pfiffer <cpfiffer@gmail.com>
yebai
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Aug 16, 2023
* first draft * abstractcontext + tests * bug * externalsampler() in tests * Name Tupple problems * moving stuff to DynamicPPL RP * using new DynamicPPL PR * mistakenly removed line * specific constructors * no StaticMH RWMH * Bump bijectors compat (#2052) * CompatHelper: bump compat for Bijectors to 0.13, (keep existing compat) * Update Project.toml * Replacement for #2039 (#2040) * Fix testset for external samplers * Update abstractmcmc.jl * Update test/contrib/inference/abstractmcmc.jl Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> * Update test/contrib/inference/abstractmcmc.jl Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> * Update FillArrays compat to 1.4.1 (#2035) * Update FillArrays compat to 1.4.0 * Update test compat * Try to enable ReverseDiff tests * Update Project.toml * Update Project.toml * Bump version * Revert dependencies on FillArrays (#2042) * Update Project.toml * Update Project.toml * Fix redundant definition of `getstats` (#2044) * Fix redundant definition of `getstats` * Update Inference.jl * Revert "Update Inference.jl" This reverts commit e4f51c2. * Bump version --------- Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com> * Transfer some test utility function into DynamicPPL (#2049) * Update OptimInterface.jl * Only run optimisation tests in numerical stage. * fix function lookup after moving functions --------- Co-authored-by: Xianda Sun <sunxdt@gmail.com> * Move Optim support to extension (#2051) * Move Optim support to extension * More imports * Update Project.toml --------- Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com> --------- Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org> Co-authored-by: haris organtzidis <organtzh@gmail.com> Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> Co-authored-by: David Widmann <devmotion@users.noreply.github.com> Co-authored-by: Xianda Sun <sunxdt@gmail.com> Co-authored-by: Cameron Pfiffer <cpfiffer@gmail.com> * Bugfixes. * Add TODO. * Update mh.jl * Update Inference.jl * Removed obsolete exports. * removed unnecessary import of extract_priors * added missing ) in MH tests * fixed incorrect referneces to AdvancedMH in tests * improve ESLogDensityFunction * remove hardcoding of SimpleVarInfo * added fixme comment * minor style changes * fixed issues with MH with RandomWalkProposal being used as an external sampler * fixed accidental typo * move definitions of unflatten for NamedTuple * improved TODO * Update Project.toml --------- Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com> Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org> Co-authored-by: haris organtzidis <organtzh@gmail.com> Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com> Co-authored-by: David Widmann <devmotion@users.noreply.github.com> Co-authored-by: Xianda Sun <sunxdt@gmail.com> Co-authored-by: Cameron Pfiffer <cpfiffer@gmail.com> Co-authored-by: Hong Ge <hg344@cam.ac.uk>
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Revert #2014 which was only introduced to restrict FillArrays version.