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Alternative to #2043.

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coveralls commented Jul 18, 2023

Pull Request Test Coverage Report for Build 5591684002

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • 1 unchanged line in 1 file lost coverage.
  • Overall coverage remained the same at 0.0%

Files with Coverage Reduction New Missed Lines %
src/contrib/inference/abstractmcmc.jl 1 0%
Totals Coverage Status
Change from base Build 5579283680: 0.0%
Covered Lines: 0
Relevant Lines: 1449

💛 - Coveralls

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codecov bot commented Jul 18, 2023

Codecov Report

Patch and project coverage have no change.

Comparison is base (e1d3fef) 0.00% compared to head (6e0055f) 0.00%.

Additional details and impacted files
@@          Coverage Diff           @@
##           master   #2044   +/-   ##
======================================
  Coverage    0.00%   0.00%           
======================================
  Files          22      22           
  Lines        1450    1449    -1     
======================================
+ Misses       1450    1449    -1     
Impacted Files Coverage Δ
src/contrib/inference/abstractmcmc.jl 0.00% <ø> (ø)

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@devmotion devmotion merged commit e32bb71 into master Jul 18, 2023
@devmotion devmotion deleted the dw/getstats branch July 18, 2023 22:30
yebai added a commit that referenced this pull request Jul 27, 2023
* CompatHelper: bump compat for Bijectors to 0.13, (keep existing compat)

* Update Project.toml

* Replacement for #2039 (#2040)

* Fix testset for external samplers

* Update abstractmcmc.jl

* Update test/contrib/inference/abstractmcmc.jl

Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>

* Update test/contrib/inference/abstractmcmc.jl

Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>

* Update FillArrays compat to 1.4.1 (#2035)

* Update FillArrays compat to 1.4.0

* Update test compat

* Try to enable ReverseDiff tests

* Update Project.toml

* Update Project.toml

* Bump version

* Revert dependencies on FillArrays (#2042)

* Update Project.toml

* Update Project.toml

* Fix redundant definition of `getstats` (#2044)

* Fix redundant definition of `getstats`

* Update Inference.jl

* Revert "Update Inference.jl"

This reverts commit e4f51c2.

* Bump version

---------

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>

* Transfer some test utility function into DynamicPPL (#2049)

* Update OptimInterface.jl

* Only run optimisation tests in numerical stage.

* fix function lookup after moving functions

---------

Co-authored-by: Xianda Sun <sunxdt@gmail.com>

* Move Optim support to extension (#2051)

* Move Optim support to extension

* More imports

* Update Project.toml

---------

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>

---------

Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org>
Co-authored-by: haris organtzidis <organtzh@gmail.com>
Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>
Co-authored-by: David Widmann <devmotion@users.noreply.github.com>
Co-authored-by: Xianda Sun <sunxdt@gmail.com>
Co-authored-by: Cameron Pfiffer <cpfiffer@gmail.com>
yebai added a commit that referenced this pull request Aug 16, 2023
* first draft

* abstractcontext + tests

* bug

* externalsampler() in tests

* Name Tupple problems

* moving stuff to DynamicPPL RP

* using new DynamicPPL PR

* mistakenly removed line

* specific constructors

* no StaticMH RWMH

* Bump bijectors compat (#2052)

* CompatHelper: bump compat for Bijectors to 0.13, (keep existing compat)

* Update Project.toml

* Replacement for #2039 (#2040)

* Fix testset for external samplers

* Update abstractmcmc.jl

* Update test/contrib/inference/abstractmcmc.jl

Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>

* Update test/contrib/inference/abstractmcmc.jl

Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>

* Update FillArrays compat to 1.4.1 (#2035)

* Update FillArrays compat to 1.4.0

* Update test compat

* Try to enable ReverseDiff tests

* Update Project.toml

* Update Project.toml

* Bump version

* Revert dependencies on FillArrays (#2042)

* Update Project.toml

* Update Project.toml

* Fix redundant definition of `getstats` (#2044)

* Fix redundant definition of `getstats`

* Update Inference.jl

* Revert "Update Inference.jl"

This reverts commit e4f51c2.

* Bump version

---------

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>

* Transfer some test utility function into DynamicPPL (#2049)

* Update OptimInterface.jl

* Only run optimisation tests in numerical stage.

* fix function lookup after moving functions

---------

Co-authored-by: Xianda Sun <sunxdt@gmail.com>

* Move Optim support to extension (#2051)

* Move Optim support to extension

* More imports

* Update Project.toml

---------

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>

---------

Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org>
Co-authored-by: haris organtzidis <organtzh@gmail.com>
Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>
Co-authored-by: David Widmann <devmotion@users.noreply.github.com>
Co-authored-by: Xianda Sun <sunxdt@gmail.com>
Co-authored-by: Cameron Pfiffer <cpfiffer@gmail.com>

* Bugfixes.

* Add TODO.

* Update mh.jl

* Update Inference.jl

* Removed obsolete exports.

* removed unnecessary import of extract_priors

* added missing ) in MH tests

* fixed incorrect referneces to AdvancedMH in tests

* improve ESLogDensityFunction

* remove hardcoding of SimpleVarInfo

* added fixme comment

* minor style changes

* fixed issues with MH with RandomWalkProposal being used as an external sampler

* fixed accidental typo

* move definitions of unflatten for NamedTuple

* improved TODO

* Update Project.toml

---------

Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
Co-authored-by: CompatHelper Julia <compathelper_noreply@julialang.org>
Co-authored-by: haris organtzidis <organtzh@gmail.com>
Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>
Co-authored-by: David Widmann <devmotion@users.noreply.github.com>
Co-authored-by: Xianda Sun <sunxdt@gmail.com>
Co-authored-by: Cameron Pfiffer <cpfiffer@gmail.com>
Co-authored-by: Hong Ge <hg344@cam.ac.uk>
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3 participants