Ss mcmc diagnostic functions#3
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Aug 16, 2024
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Please seperate our each new function into its own script in the "R" folfrt - you will see examples there aslso for the documentation preamble needed for each function
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Hi Kristen, I added the diagnostic functions to the "R" folder. These functions should now take 3 inputs, a "data" argument, which specifies what jags output you want to input, an "iso", and "parameter" input. I think I was able to fix the labeling issue for the most part. @kaiemjoy |
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Creating a new pull request for current diagnostics. Closing this old pull request. |
This was referenced May 21, 2026
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This code adds a number of diagnostic functions to submit_longdata, each with an "iso" and "parameter" input. These functions include plot_jags_dens(iso,parameter), plot_jags_hist(""), plot_jags_trace(""), and summ_plot(""). Of note, default values will output all combinations of parameters and isos. One possible further difficult will be putting adequate titles and labeling on each plot.