WayScience · axiomcura · Mar 22, 2026 · Mar 22, 2026 · Mar 22, 2026 · Mar 25, 2026
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -14,7 +14,7 @@ repos:
 
   # Format TOML files early (before other tools might read config)
 -   repo: https://github.com/pappasam/toml-sort
-    rev: v0.24.3
+    rev: v0.24.4
     hooks:
     -   id: toml-sort
         args: ["--in-place"]
@@ -35,7 +35,7 @@ repos:
 
   # Ruff for linting and formatting Python files
 -   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.7
+    rev: v0.15.9
     hooks:
     -   id: ruff-check
         args: ["--fix"]

diff --git a/notebooks/2.cfret-analysis/plots/1.on-and-off-pca-and-umap-plots.ipynb b/notebooks/2.cfret-analysis/plots/1.on-and-off-pca-and-umap-plots.ipynb
diff --git a/notebooks/4.cpjump1-analysis/1.generate-on-off-signatures.ipynb b/notebooks/4.cpjump1-analysis/1.generate-on-off-signatures.ipynb
diff --git a/notebooks/4.cpjump1-analysis/2.run-compound-replicate-consistency-analysis.ipynb b/notebooks/4.cpjump1-analysis/2.run-compound-replicate-consistency-analysis.ipynb