Release ggalign 0.1.0 · Yunuuuu/ggalign

Breaking changes

Now, all *_free() layouts have been removed, all layout has been splitted into two type: align
discrete or continous vairables.

new helper function memo_order() to reorder the oncoplot samples.
new geom_subrect() and geom_subtile() to subdivide rectangles with shared borders into a grid.
new cross_link function to reset the layout ordering index or layout panel group, and
add plot to connect selected observations.
new cross_mark function to reset the layout ordering index or layout panel group, and
add plot to annotate observations.
new pair_links() function to create pairs of observation groups.
new mark_draw(), mark_line(), mark_tetragon() to define the links to
connect the marked observations.
new link_draw(), link_line(), link_tetragon() to define the links to
connect a pair of observations
new ggmark() to add a plot to annotate selected observations.
new element_vec() functions to apply function to the vectorized fields of
the theme element object.
new no_expansion() function to remove scale expansion.
new layout circle_layout() to arrange plot in a circular.
new raster_magick() function to post-processing the image raster with magick package was added.
new fortify_matrix.GISTIC() method for GISTIC object from maftools package (#24).
+ operator now will respect with_quad().
new ggalign_attr_set() and ggalign_attr_get() for basic operations of attached attribute.
new geom_draw() function to draw ggplot2 layer with customized draw function.

Now, with_quad() wraps the object into a list with the class with_quad. This approach offers greater flexibility in defining the actions associated with with_quad, allowing for more customizable behavior (#26, @Yunuuuu).
Now, we always set as.table = FALSE when using ggplot2 facet_*() functions,
we don't need to reorder the panel when drawing.
free_gg, align and the new cross_link objects have been collapsed to one class ggalign_plot