Reading local PDB file failed, got file from PDB database. No bug info printed and it stayed 0% instead of 100%. #421
Description
Describe the bug
Reading local PDB file failed, got file from PDB database. No bug info printed and it stayed 0% instead of 100%.
To Reproduce
Output：
Reading PDB file... ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0% -:--:--
That's all I got from running the below code：
file = "mmdb_8FYW.pdb"
from graphein.protein.config import ProteinGraphConfig
from graphein.protein.graphs import construct_graph
config = ProteinGraphConfig(
)
G = construct_graph(path=file, config=config)
print(G)
Expected behavior
The reading finished and a graph printed.
Screenshots
- OS: [Win 10]
- Python Version 3.9.21
- Graphein Version [1.7.7] & pip installed
Additional context
Could u help, many thanks.