[BUG] networkx tests failed with crash #2823
Description
Describe the bug
2023-06-06T05:18:40.5733303Z
2023-06-06T05:18:40.5733743Z =============================== warnings summary ===============================
2023-06-06T05:18:40.5734545Z ../../../.local/lib/python3.8/site-packages/graphscope/nx/conftest.py:47
2023-06-06T05:18:40.5735523Z /home/runner/.local/lib/python3.8/site-packages/graphscope/nx/conftest.py:47: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html
2023-06-06T05:18:40.5736097Z item.add_marker(pytest.mark.timeout(600))
2023-06-06T05:18:40.5736271Z
2023-06-06T05:18:40.5736741Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestGraphTransformation::test_empty_nx_to_gs
2023-06-06T05:18:40.5737415Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestDigraphTransformation::test_empty_nx_to_gs
2023-06-06T05:18:40.5738114Z /home/runner/.local/lib/python3.8/site-packages/graphscope/framework/utils.py:536: DeprecationWarning: `np.bool8` is a deprecated alias for `np.bool_`. (Deprecated NumPy 1.24)
2023-06-06T05:18:40.5738522Z np.bool8: graph_def_pb2.BOOL,
2023-06-06T05:18:40.5738664Z
2023-06-06T05:18:40.5739064Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestGraphTransformation::test_multi_label_gs_to_nx
2023-06-06T05:18:40.5739750Z /home/runner/.local/lib/python3.8/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-10071
2023-06-06T05:18:40.5740127Z
2023-06-06T05:18:40.5740315Z Traceback (most recent call last):
2023-06-06T05:18:40.5740611Z File "/usr/lib/python3.8/threading.py", line 932, in _bootstrap_inner
2023-06-06T05:18:40.5740996Z self.run()
2023-06-06T05:18:40.5741236Z File "/usr/lib/python3.8/threading.py", line 870, in run
2023-06-06T05:18:40.5741516Z self._target(*self._args, **self._kwargs)
2023-06-06T05:18:40.5741975Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/graph.py", line 386, in _del
2023-06-06T05:18:40.5742288Z graph.cache.shutdown()
2023-06-06T05:18:40.5742737Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 257, in shutdown
2023-06-06T05:18:40.5743045Z future.result()
2023-06-06T05:18:40.5743324Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 437, in result
2023-06-06T05:18:40.5743589Z return self.__get_result()
2023-06-06T05:18:40.5743881Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 389, in __get_result
2023-06-06T05:18:40.5744163Z raise self._exception
2023-06-06T05:18:40.5744497Z File "/usr/lib/python3.8/concurrent/futures/thread.py", line 57, in run
2023-06-06T05:18:40.5744811Z result = self.fn(*self.args, **self.kwargs)
2023-06-06T05:18:40.5745292Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 361, in _get_node_attr_cache
2023-06-06T05:18:40.5745655Z node_attr_cache = msgpack.load(fp, use_list=False)
2023-06-06T05:18:40.5746096Z File "/home/runner/.local/lib/python3.8/site-packages/msgpack/__init__.py", line 49, in unpack
2023-06-06T05:18:40.5746398Z return unpackb(data, **kwargs)
2023-06-06T05:18:40.5746689Z File "msgpack/_unpacker.pyx", line 201, in msgpack._cmsgpack.unpackb
2023-06-06T05:18:40.5747028Z msgpack.exceptions.ExtraData: unpack(b) received extra data.
2023-06-06T05:18:40.5747271Z
2023-06-06T05:18:40.5747557Z warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg))
2023-06-06T05:18:40.5747848Z
2023-06-06T05:18:40.5748249Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestGraphTransformation::test_str_oid_gs_to_nx
2023-06-06T05:18:40.5748934Z /home/runner/.local/lib/python3.8/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-10115
2023-06-06T05:18:40.5749308Z
2023-06-06T05:18:40.5749498Z Traceback (most recent call last):
2023-06-06T05:18:40.5749780Z File "/usr/lib/python3.8/threading.py", line 932, in _bootstrap_inner
2023-06-06T05:18:40.5750080Z self.run()
2023-06-06T05:18:40.5750329Z File "/usr/lib/python3.8/threading.py", line 870, in run
2023-06-06T05:18:40.5750594Z self._target(*self._args, **self._kwargs)
2023-06-06T05:18:40.5751035Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/graph.py", line 386, in _del
2023-06-06T05:18:40.5751353Z graph.cache.shutdown()
2023-06-06T05:18:40.5751787Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 257, in shutdown
2023-06-06T05:18:40.5752090Z future.result()
2023-06-06T05:18:40.5752370Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 437, in result
2023-06-06T05:18:40.5752632Z return self.__get_result()
2023-06-06T05:18:40.5752923Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 389, in __get_result
2023-06-06T05:18:40.5753193Z raise self._exception
2023-06-06T05:18:40.5753475Z File "/usr/lib/python3.8/concurrent/futures/thread.py", line 57, in run
2023-06-06T05:18:40.5753767Z result = self.fn(*self.args, **self.kwargs)
2023-06-06T05:18:40.5754576Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 361, in _get_node_attr_cache
2023-06-06T05:18:40.5754949Z node_attr_cache = msgpack.load(fp, use_list=False)
2023-06-06T05:18:40.5755373Z File "/home/runner/.local/lib/python3.8/site-packages/msgpack/__init__.py", line 49, in unpack
2023-06-06T05:18:40.5755686Z return unpackb(data, **kwargs)
2023-06-06T05:18:40.5755987Z File "msgpack/_unpacker.pyx", line 201, in msgpack._cmsgpack.unpackb
2023-06-06T05:18:40.5756399Z msgpack.exceptions.ExtraData: unpack(b) received extra data.
2023-06-06T05:18:40.5756638Z
2023-06-06T05:18:40.5756931Z warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg))
2023-06-06T05:18:40.5757162Z
2023-06-06T05:18:40.5757564Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestGraphTransformation::test_multiple_sessions
2023-06-06T05:18:40.5758249Z /home/runner/.local/lib/python3.8/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-10136
2023-06-06T05:18:40.5758611Z
2023-06-06T05:18:40.5758799Z Traceback (most recent call last):
2023-06-06T05:18:40.5759083Z File "/usr/lib/python3.8/threading.py", line 932, in _bootstrap_inner
2023-06-06T05:18:40.5759335Z self.run()
2023-06-06T05:18:40.5759583Z File "/usr/lib/python3.8/threading.py", line 870, in run
2023-06-06T05:18:40.5759909Z self._target(*self._args, **self._kwargs)
2023-06-06T05:18:40.5760354Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/graph.py", line 386, in _del
2023-06-06T05:18:40.5760674Z graph.cache.shutdown()
2023-06-06T05:18:40.5761113Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 257, in shutdown
2023-06-06T05:18:40.5761407Z future.result()
2023-06-06T05:18:40.5761683Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 437, in result
2023-06-06T05:18:40.5761951Z return self.__get_result()
2023-06-06T05:18:40.5762233Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 389, in __get_result
2023-06-06T05:18:40.5762504Z raise self._exception
2023-06-06T05:18:40.5762784Z File "/usr/lib/python3.8/concurrent/futures/thread.py", line 57, in run
2023-06-06T05:18:40.5763144Z result = self.fn(*self.args, **self.kwargs)
2023-06-06T05:18:40.5763613Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 361, in _get_node_attr_cache
2023-06-06T05:18:40.5763989Z node_attr_cache = msgpack.load(fp, use_list=False)
2023-06-06T05:18:40.5764423Z File "/home/runner/.local/lib/python3.8/site-packages/msgpack/__init__.py", line 49, in unpack
2023-06-06T05:18:40.5764719Z return unpackb(data, **kwargs)
2023-06-06T05:18:40.5765013Z File "msgpack/_unpacker.pyx", line 201, in msgpack._cmsgpack.unpackb
2023-06-06T05:18:40.5765412Z msgpack.exceptions.ExtraData: unpack(b) received extra data.
2023-06-06T05:18:40.5765654Z
2023-06-06T05:18:40.5765943Z warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg))
2023-06-06T05:18:40.5766178Z
2023-06-06T05:18:40.5766592Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestDigraphTransformation::test_multi_label_gs_to_nx
2023-06-06T05:18:40.5767287Z /home/runner/.local/lib/python3.8/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-10537
2023-06-06T05:18:40.5767647Z
2023-06-06T05:18:40.5767835Z Traceback (most recent call last):
2023-06-06T05:18:40.5768122Z File "/usr/lib/python3.8/threading.py", line 932, in _bootstrap_inner
2023-06-06T05:18:40.5768365Z self.run()
2023-06-06T05:18:40.5768607Z File "/usr/lib/python3.8/threading.py", line 870, in run
2023-06-06T05:18:40.5768880Z self._target(*self._args, **self._kwargs)
2023-06-06T05:18:40.5769324Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/graph.py", line 386, in _del
2023-06-06T05:18:40.5769638Z graph.cache.shutdown()
2023-06-06T05:18:40.5770079Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 257, in shutdown
2023-06-06T05:18:40.5770385Z future.result()
2023-06-06T05:18:40.5770649Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 437, in result
2023-06-06T05:18:40.5770919Z return self.__get_result()
2023-06-06T05:18:40.5775223Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 389, in __get_result
2023-06-06T05:18:40.5775676Z raise self._exception
2023-06-06T05:18:40.5775952Z File "/usr/lib/python3.8/concurrent/futures/thread.py", line 57, in run
2023-06-06T05:18:40.5776251Z result = self.fn(*self.args, **self.kwargs)
2023-06-06T05:18:40.5776800Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 361, in _get_node_attr_cache
2023-06-06T05:18:40.5777162Z node_attr_cache = msgpack.load(fp, use_list=False)
2023-06-06T05:18:40.5777602Z File "/home/runner/.local/lib/python3.8/site-packages/msgpack/__init__.py", line 49, in unpack
2023-06-06T05:18:40.5777905Z return unpackb(data, **kwargs)
2023-06-06T05:18:40.5778194Z File "msgpack/_unpacker.pyx", line 201, in msgpack._cmsgpack.unpackb
2023-06-06T05:18:40.5778549Z msgpack.exceptions.ExtraData: unpack(b) received extra data.
2023-06-06T05:18:40.5778800Z
2023-06-06T05:18:40.5779131Z warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg))
2023-06-06T05:18:40.5779369Z
2023-06-06T05:18:40.5779808Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestDigraphTransformation::test_str_oid_gs_to_nx
2023-06-06T05:18:40.5780582Z /home/runner/.local/lib/python3.8/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-10581
2023-06-06T05:18:40.5780951Z
2023-06-06T05:18:40.5781142Z Traceback (most recent call last):
2023-06-06T05:18:40.5781437Z File "/usr/lib/python3.8/threading.py", line 932, in _bootstrap_inner
2023-06-06T05:18:40.5781686Z self.run()
2023-06-06T05:18:40.5781928Z File "/usr/lib/python3.8/threading.py", line 870, in run
2023-06-06T05:18:40.5782200Z self._target(*self._args, **self._kwargs)
2023-06-06T05:18:40.5782692Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/graph.py", line 386, in _del
2023-06-06T05:18:40.5783011Z graph.cache.shutdown()
2023-06-06T05:18:40.5783452Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 257, in shutdown
2023-06-06T05:18:40.5783749Z future.result()
2023-06-06T05:18:40.5784028Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 437, in result
2023-06-06T05:18:40.5784308Z return self.__get_result()
2023-06-06T05:18:40.5784654Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 389, in __get_result
2023-06-06T05:18:40.5784920Z raise self._exception
2023-06-06T05:18:40.5785198Z File "/usr/lib/python3.8/concurrent/futures/thread.py", line 57, in run
2023-06-06T05:18:40.5785497Z result = self.fn(*self.args, **self.kwargs)
2023-06-06T05:18:40.5785963Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 361, in _get_node_attr_cache
2023-06-06T05:18:40.5786335Z node_attr_cache = msgpack.load(fp, use_list=False)
2023-06-06T05:18:40.5786775Z File "/home/runner/.local/lib/python3.8/site-packages/msgpack/__init__.py", line 49, in unpack
2023-06-06T05:18:40.5787078Z return unpackb(data, **kwargs)
2023-06-06T05:18:40.5787362Z File "msgpack/_unpacker.pyx", line 201, in msgpack._cmsgpack.unpackb
2023-06-06T05:18:40.5787711Z msgpack.exceptions.ExtraData: unpack(b) received extra data.
2023-06-06T05:18:40.5787965Z
2023-06-06T05:18:40.5788244Z warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg))
2023-06-06T05:18:40.5788469Z
2023-06-06T05:18:40.5788884Z .local/lib/python3.8/site-packages/graphscope/nx/tests/test_transformation.py::TestDigraphTransformation::test_error_on_wrong_nx_type
2023-06-06T05:18:40.5789571Z /home/runner/.local/lib/python3.8/site-packages/_pytest/threadexception.py:73: PytestUnhandledThreadExceptionWarning: Exception in thread Thread-10602
2023-06-06T05:18:40.5789933Z
2023-06-06T05:18:40.5790111Z Traceback (most recent call last):
2023-06-06T05:18:40.5790404Z File "/usr/lib/python3.8/threading.py", line 932, in _bootstrap_inner
2023-06-06T05:18:40.5790719Z self.run()
2023-06-06T05:18:40.5790956Z File "/usr/lib/python3.8/threading.py", line 870, in run
2023-06-06T05:18:40.5791224Z self._target(*self._args, **self._kwargs)
2023-06-06T05:18:40.5791666Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/graph.py", line 386, in _del
2023-06-06T05:18:40.5791973Z graph.cache.shutdown()
2023-06-06T05:18:40.5792405Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 257, in shutdown
2023-06-06T05:18:40.5792715Z future.result()
2023-06-06T05:18:40.5792981Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 437, in result
2023-06-06T05:18:40.5793254Z return self.__get_result()
2023-06-06T05:18:40.5793545Z File "/usr/lib/python3.8/concurrent/futures/_base.py", line 389, in __get_result
2023-06-06T05:18:40.5793821Z raise self._exception
2023-06-06T05:18:40.5794344Z File "/usr/lib/python3.8/concurrent/futures/thread.py", line 57, in run
2023-06-06T05:18:40.5794655Z result = self.fn(*self.args, **self.kwargs)
2023-06-06T05:18:40.5795141Z File "/home/runner/.local/lib/python3.8/site-packages/graphscope/nx/classes/cache.py", line 361, in _get_node_attr_cache
2023-06-06T05:18:40.5795502Z node_attr_cache = msgpack.load(fp, use_list=False)
2023-06-06T05:18:40.5795940Z File "/home/runner/.local/lib/python3.8/site-packages/msgpack/__init__.py", line 49, in unpack
2023-06-06T05:18:40.5796249Z return unpackb(data, **kwargs)
2023-06-06T05:18:40.5796537Z File "msgpack/_unpacker.pyx", line 201, in msgpack._cmsgpack.unpackb
2023-06-06T05:18:40.5796886Z msgpack.exceptions.ExtraData: unpack(b) received extra data.
2023-06-06T05:18:40.5797144Z
2023-06-06T05:18:40.5797433Z warnings.warn(pytest.PytestUnhandledThreadExceptionWarning(msg))
2023-06-06T05:18:40.5797720Z
2023-06-06T05:18:40.5798096Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_function.py::TestFunction::test_info_digraph
2023-06-06T05:18:40.5798771Z /home/runner/.local/lib/python3.8/site-packages/networkx/classes/tests/test_function.py:281: DeprecationWarning: info is deprecated and will be removed in version 3.0.
2023-06-06T05:18:40.5799129Z
2023-06-06T05:18:40.5799288Z info = nx.info(G)
2023-06-06T05:18:40.5799411Z
2023-06-06T05:18:40.5799822Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_function.py::TestFunction::test_info_digraph
2023-06-06T05:18:40.5800469Z /home/runner/.local/lib/python3.8/site-packages/networkx/classes/tests/test_function.py:285: DeprecationWarning: info is deprecated and will be removed in version 3.0.
2023-06-06T05:18:40.5800811Z
2023-06-06T05:18:40.5800974Z info = nx.info(G, n=1)
2023-06-06T05:18:40.5801104Z
2023-06-06T05:18:40.5801459Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_function.py::TestFunction::test_info_digraph
2023-06-06T05:18:40.5802078Z /home/runner/.local/lib/python3.8/site-packages/_pytest/python_api.py:951: DeprecationWarning: info is deprecated and will be removed in version 3.0.
2023-06-06T05:18:40.5802425Z
2023-06-06T05:18:40.5802593Z func(*args[1:], **kwargs)
2023-06-06T05:18:40.5802722Z
2023-06-06T05:18:40.5803085Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_contains
2023-06-06T05:18:40.5803753Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5804508Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_contains is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5804933Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5805434Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5805789Z fixture_result = next(generator)
2023-06-06T05:18:40.5805996Z
2023-06-06T05:18:40.5806352Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_iter
2023-06-06T05:18:40.5807012Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5807762Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_iter is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5808185Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5808654Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5808998Z fixture_result = next(generator)
2023-06-06T05:18:40.5809149Z
2023-06-06T05:18:40.5809566Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_exceptions
2023-06-06T05:18:40.5810237Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5810986Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_exceptions is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5811410Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5811880Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5812221Z fixture_result = next(generator)
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2023-06-06T05:18:40.5813416Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5814163Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestReverseView::test_subclass is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5814588Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5815096Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
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2023-06-06T05:18:40.5816617Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5817355Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToDirected::test_directed is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5817780Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5818251Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5818592Z fixture_result = next(generator)
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2023-06-06T05:18:40.5819749Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5820483Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToDirected::test_contains is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5820913Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5821430Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
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2023-06-06T05:18:40.5822953Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5823680Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToDirected::test_pickle is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5824108Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5824578Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
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2023-06-06T05:18:40.5826145Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5826899Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToDirected::test_already_directed is using nose-specific method: `setup(self)`
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2023-06-06T05:18:40.5827798Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
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2023-06-06T05:18:40.5829361Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5830128Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToDirected::test_iter is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5830584Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5831058Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5831402Z fixture_result = next(generator)
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2023-06-06T05:18:40.5832574Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5833327Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToUndirected::test_directed is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5833761Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5834322Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
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2023-06-06T05:18:40.5835850Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5836596Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToUndirected::test_contains is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5837093Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5837561Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
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2023-06-06T05:18:40.5839093Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5839854Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToUndirected::test_already_directed is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5840344Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5840815Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5841152Z fixture_result = next(generator)
2023-06-06T05:18:40.5841297Z
2023-06-06T05:18:40.5841662Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToUndirected::test_iter
2023-06-06T05:18:40.5842321Z /home/runner/.local/lib/python3.8/site-packages/_pytest/fixtures.py:902: PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
2023-06-06T05:18:40.5843048Z .local/lib/python3.8/site-packages/graphscope/nx/tests/classes/test_graphviews.py::TestToUndirected::test_iter is using nose-specific method: `setup(self)`
2023-06-06T05:18:40.5843464Z To remove this warning, rename it to `setup_method(self)`
2023-06-06T05:18:40.5843987Z See docs: https://docs.pytest.org/en/stable/deprecations.html#support-for-tests-written-for-nose
2023-06-06T05:18:40.5844321Z fixture_result = next(generator)
2023-06-06T05:18:40.5844455Z
2023-06-06T05:18:40.5844710Z -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
2023-06-06T05:18:40.5845059Z ========== 555 passed, 23 skipped, 25 warnings in 2529.34s (0:42:09) ===========
2023-06-06T05:19:22.3530778Z /home/runner/work/_temp/28480107-f529-4759-b90c-101bdc95ed3a.sh: line 4: 1896 Segmentation fault (core dumped) python3 -m pytest --exitfirst -s -v $(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/tests --ignore=$(dirname $(python3 -c "import graphscope; print(graphscope.__file__)"))/nx/tests/convert
2023-06-06T05:19:22.3596473Z ##[error]Process completed with exit code 139.
2023-06-06T05:19:22.3804753Z Post job cleanup.
2023-06-06T05:19:22.5398168Z [command]/usr/bin/git version
2023-06-06T05:19:22.5483431Z git version 2.40.1
2023-06-06T05:19:22.5537436Z Temporarily overriding HOME='/home/runner/work/_temp/77c92fa5-2fd8-46b1-aad4-87b724ea3e03' before making global git config changes
2023-06-06T05:19:22.5540867Z Adding repository directory to the temporary git global config as a safe directory
2023-06-06T05:19:22.5548097Z [command]/usr/bin/git config --global --add safe.directory /home/runner/work/GraphScope/GraphScope
2023-06-06T05:19:22.5623957Z [command]/usr/bin/git config --local --name-only --get-regexp core\.sshCommand
2023-06-06T05:19:22.5676530Z [command]/usr/bin/git submodule foreach --recursive sh -c "git config --local --name-only --get-regexp 'core\.sshCommand' && git config --local --unset-all 'core.sshCommand' || :"
2023-06-06T05:19:22.6006192Z [command]/usr/bin/git config --local --name-only --get-regexp http\.https\:\/\/github\.com\/\.extraheader
2023-06-06T05:19:22.6033120Z http.https://github.com/.extraheader
2023-06-06T05:19:22.6045161Z [command]/usr/bin/git config --local --unset-all http.https://github.com/.extraheader
2023-06-06T05:19:22.6079962Z [command]/usr/bin/git submodule foreach --recursive sh -c "git config --local --name-only --get-regexp 'http\.https\:\/\/github\.com\/\.extraheader' && git config --local --unset-all 'http.https://github.com/.extraheader' || :"
2023-06-06T05:19:22.6654007Z Cleaning up orphan processesAdditional context
See also: https://github.com/alibaba/GraphScope/actions/runs/5184446534/jobs/9343725706