baseq Version 0.1.4

📓 baseq : Basic Sequence Processing Tool for Biological Data

🔢 Version 0.1.4

#️⃣ Commands :

💡 Preprocessing :
🧬 clean_sequence()
🧬 clean_DNA_sequence()
🧬 clean_RNA_sequence()
🧬 clean_DNA_file()
🧬 clean_RNA_file()
🧬 count_bases()
🧬 count_seq_pattern()
🧬 gc_content()
🧬 gc_content_file()

💡 From DNA :
🧬 dna_to_protein()
🧬 dna_to_rna()
🧬 reverse_complement()

💡 From RNA :
🧬 rna_reverse_complement()
🧬 rna_to_dna()
🧬 rna_to_protein()

💡 Readers :
🧬 read_fasta()
🧬 read.fasta_to_df()
🧬 read.fasta_to_list()
🧬 read.fastq_to_list()

💡 Writers :
🧬 write.df_to_fasta()
🧬 write.df_to_fastq()
🧬 write.list_to_fasta()
🧬 write.list_to_fastq()

💡 Converters :
🧬 fastq_to_fasta()

Links :
🔗 CRAN REPO for version 0.1.0 : baseq: Basic Sequence Processing Tool for Biological Data

Authors :
Ambu Vijayan Young Professional, ICAR - Central Tuber Crops Research Institute
Dr. J. Sreekumar Principal Scientist, ICAR - Central Tuber Crops Research Institute

Maintainer :
Ambu Vijayan