Bump GitHub Actions and pre-commit Hooks#268
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Bumps [actions/setup-python](https://github.com/actions/setup-python) from 5 to 6. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](actions/setup-python@v5...v6) --- updated-dependencies: - dependency-name: actions/setup-python dependency-version: '6' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>
Bumps [github/codeql-action](https://github.com/github/codeql-action) from 3 to 4. - [Release notes](https://github.com/github/codeql-action/releases) - [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md) - [Commits](github/codeql-action@v3...v4) --- updated-dependencies: - dependency-name: github/codeql-action dependency-version: '4' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>
Bumps [actions/checkout](https://github.com/actions/checkout) from 4 to 6. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v4...v6) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: '6' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>
Bumps [actions/cache](https://github.com/actions/cache) from 4 to 5. - [Release notes](https://github.com/actions/cache/releases) - [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md) - [Commits](actions/cache@v4...v5) --- updated-dependencies: - dependency-name: actions/cache dependency-version: '5' dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>
Updates the requirements on [sphinx](https://github.com/sphinx-doc/sphinx) to permit the latest version. - [Release notes](https://github.com/sphinx-doc/sphinx/releases) - [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES.rst) - [Commits](sphinx-doc/sphinx@v5.0.0...v9.0.0) --- updated-dependencies: - dependency-name: sphinx dependency-version: 9.0.0 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com>
Downgrades: * https://github.com/python-jsonschema/check-jsonschema from `0.31.2` to `0.30.0` * https://github.com/PyCQA/bandit from `1.8.3` to `1.7.10`
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MacOS 13 runners are not supported anymore (actions/runner-images#13046).
Ubuntu 20.04 runners are not supported anymore (https://github.blog/changelog/2025-01-15-github-actions-ubuntu-20-runner-image-brownout-dates-and-other-breaking-changes/).
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MDAnalysis 2.0 cannot be compiled using the MacOS C/C++ compiler clang. Building with GNU gcc/g++ is possible, but the application crashes at runtime, likely because NumPy for MacOS is compiled with clang. MDAnalysis requires NumPy >=1.19.2, <2.0
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