1.4.5

Full Changelog: 1.4.2...1.4.5

1.4.2

Unclustered samples are now treated as like clusters in that they get their own distance matrix and tree metadata TSV.

What's Changed

• Mark unclustered samples by @aofarrel in #7

Full Changelog: 1.4.1...1.4.2

1.4.1

Find clusters recursively!

What's Changed

• Find clusters - but better! by @aofarrel in #6

Full Changelog: 1.4.0...1.4.1

1.4.0

Rudimentary implementation of cluster detection. Use 1.4.1 instead, just pinning for the record.

What's Changed

• Find clusters by @aofarrel in #5

Full Changelog: 1.3.1...1.4.0

1.3.1

Fixes logging always being verbose.

1.3.0 (1.0.6)

Pulls changes from https://github.com/lilymaryam/parsevcf/releases/tag/1.0.5 and [IN PROGRESS].

• Fixes diff files blithely copying down positions that have failed in the VCF's FILTER column
• Fixes the distance matrix having a messed up first line (was just missing a newline)
• Small tweaks to distance matrix

1.2.0 (1.0.4)

Please see this PR for more information.

Full Changelog: 1.1.9...1.2.0

1.1.9 (1.0.4)

Fix a user-input mask file being interpreted as a string, resulting in the task failing when trying to estimate how much disk size a string needs.

1.1.8 (1.0.4)

What's Changed

• Make TBMF optional by @aofarrel in #3

Full Changelog: 1.1.7...1.1.8

1.1.7 (1.0.4)

Full Changelog: 1.1.4...1.1.7

Bug fixes