chore: update deps

package.json

@@ -15,7 +15,7 @@
     "check-format": "prettier -c ."
   },
   "devDependencies": {
-    "prettier": "^3.2.5",
-    "prettier-plugin-svelte": "^3.2.3"
+    "prettier": "^3.6.2",
+    "prettier-plugin-svelte": "^3.4.0"
   }
 }

packages/backend/package.json

@@ -8,8 +8,8 @@
   },
   "devDependencies": {
     "@embedding-atlas/viewer": "*",
-    "anywidget": "^0.9.13",
+    "anywidget": "^0.9.18",
     "streamlit-component-lib": "^2.0.0",
-    "vite": "^6.1.0"
+    "vite": "^7.0.6"
   }
 }

packages/component/package.json

@@ -35,22 +35,22 @@
     }
   },
   "devDependencies": {
-    "@sveltejs/vite-plugin-svelte": "^5.0.0",
+    "@sveltejs/vite-plugin-svelte": "^6.1.0",
     "@tsconfig/svelte": "^5.0.4",
     "@types/d3-color": "^3.1.3",
-    "@uwdata/mosaic-core": ">=0.15.0",
-    "@uwdata/mosaic-sql": ">=0.15.0",
-    "@uwdata/vgplot": ">=0.15.0",
-    "@webgpu/types": "^0.1.47",
+    "@uwdata/mosaic-core": ">=0.18.0",
+    "@uwdata/mosaic-sql": ">=0.18.0",
+    "@uwdata/vgplot": ">=0.18.0",
+    "@webgpu/types": "^0.1.64",
     "d3-color": "^3.1.0",
     "fast-kde": "0.2.2",
-    "publint": "^0.3.0",
+    "publint": "^0.3.12",
     "quickselect": "^3.0.0",
     "simplify-js": "^1.2.4",
-    "svelte": "^5.1.9",
-    "typescript": "^5.4.2",
-    "vite": "^6.1.0",
-    "vite-plugin-dts": "^4.0.0",
-    "vite-plugin-wasm": "^3.3.0"
+    "svelte": "^5.37.3",
+    "typescript": "^5.9.2",
+    "vite": "^7.0.6",
+    "vite-plugin-dts": "^4.5.4",
+    "vite-plugin-wasm": "^3.5.0"
   }
 }

packages/component/src/lib/embedding_view/mosaic_client.ts

@@ -1,5 +1,6 @@
 // Copyright (c) 2025 Apple Inc. Licensed under MIT License.
 
+import type { Table } from "@uwdata/flechette";
 import type { Coordinator } from "@uwdata/mosaic-core";
 import * as SQL from "@uwdata/mosaic-sql";
 
@@ -107,7 +108,7 @@ export async function queryApproximateDensity(
 }> {
   let { x, y, table } = source;
   // Find the view transform that fits all data points in a square view.
-  let r = await coordinator.query(
+  let r = (await coordinator.query(
     SQL.Query.from(table).select({
       centerX: SQL.sql`MEDIAN(${SQL.column(x)})`,
       centerY: SQL.sql`MEDIAN(${SQL.column(y)})`,
@@ -119,7 +120,7 @@ export async function queryApproximateDensity(
           }
         : {}),
     }),
-  );
+  )) as Table;
   let { centerX, centerY, stdX, stdY, maxCategory } = r.get(0);
   let scaler = 1.0 / (Math.max(stdX, stdY, 1e-3) * 3);
 
@@ -139,7 +140,7 @@ export async function queryApproximateDensity(
     maxCount: SQL.sql`MAX(count)::INT`,
   });
 
-  r = await coordinator.query(q);
+  r = (await coordinator.query(q)) as Table;
   let { maxCount, totalCount } = r.get(0);
   let maxDensity = maxCount / (binWidth * binWidth);
 
@@ -232,7 +233,7 @@ export class DataPointQuery {
         q = q.where(predicate);
       }
       q = q.orderby(SQL.sql`(x - (${px}))**2 + (y - (${py}))**2`).limit(1);
-      let result = await this.coordinator.query(q);
+      let result = (await this.coordinator.query(q)) as Table;
       let point = result.get(0);
       if (point) {
         this.lastDistance = Math.max(Math.abs(point.x - px), Math.abs(point.y - py)) * 4;
@@ -254,7 +255,7 @@ export class DataPointQuery {
         identifiers.map((x) => SQL.literal(x)),
       ),
     );
-    let result = Array.from(await this.coordinator.query(q));
+    let result = Array.from((await this.coordinator.query(q)) as Table);
     return result.map((row) => this._convertToDataPoint(row));
   }
 }

packages/component/src/lib/renderer_interface.ts

@@ -8,9 +8,9 @@ export interface EmbeddingRendererProps {
   mode: RenderMode;
   colorScheme: "light" | "dark";
 
-  x: Float32Array;
-  y: Float32Array;
-  category: Uint8Array | null;
+  x: Float32Array<ArrayBuffer>;
+  y: Float32Array<ArrayBuffer>;
+  category: Uint8Array<ArrayBuffer> | null;
 
   categoryCount: number;
   categoryColors: string[] | null;

packages/component/src/lib/webgpu_renderer/renderer.ts

@@ -181,9 +181,9 @@ export class EmbeddingRendererWebGPU implements EmbeddingRenderer {
 export interface RenderInputs {
   mode: ValueNode<RenderMode>;
   colorScheme: ValueNode<"light" | "dark">;
-  xData: ValueNode<Float32Array>;
-  yData: ValueNode<Float32Array>;
-  categoryData: ValueNode<Uint8Array | null>;
+  xData: ValueNode<Float32Array<ArrayBuffer>>;
+  yData: ValueNode<Float32Array<ArrayBuffer>>;
+  categoryData: ValueNode<Uint8Array<ArrayBuffer> | null>;
   categoryCount: ValueNode<number>;
   categoryColors: ValueNode<string[] | null>;
   pointSize: ValueNode<number>;

packages/docs/package.json

@@ -6,7 +6,7 @@
     "generate_assets": "./generate_assets.sh"
   },
   "devDependencies": {
-    "vitepress": "^1.1.4",
-    "gh-pages": "^6.1.1"
+    "vitepress": "^1.6.3",
+    "gh-pages": "^6.3.0"
   }
 }

packages/embedding-atlas/package.json

@@ -78,9 +78,9 @@
     "@embedding-atlas/viewer": "*",
     "@embedding-atlas/table": "*",
     "@embedding-atlas/umap-wasm": "*",
-    "tslib": "^2.6.2",
-    "typescript": "^5.2.2",
-    "vite": "^6.1.0",
-    "vite-plugin-dts": "^4.3.0"
+    "tslib": "^2.8.1",
+    "typescript": "^5.9.2",
+    "vite": "^7.0.6",
+    "vite-plugin-dts": "^4.5.4"
   }
 }

packages/examples/package.json

@@ -11,22 +11,22 @@
   },
   "devDependencies": {
     "embedding-atlas": "*",
-    "@sveltejs/vite-plugin-svelte": "^5.0.0",
-    "@tailwindcss/postcss": "^4.0.11",
-    "@tsconfig/svelte": "^5.0.2",
-    "@uwdata/mosaic-core": ">=0.15.0",
-    "@uwdata/mosaic-spec": ">=0.15.0",
-    "@uwdata/mosaic-sql": ">=0.15.0",
-    "@uwdata/vgplot": ">=0.15.0",
-    "postcss": "^8.4.38",
-    "react": "^19.0.0",
-    "react-dom": "^19.0.0",
-    "svelte": "^5.1.9",
+    "@sveltejs/vite-plugin-svelte": "^6.1.0",
+    "@tailwindcss/postcss": "^4.1.11",
+    "@tsconfig/svelte": "^5.0.4",
+    "@uwdata/mosaic-core": ">=0.18.0",
+    "@uwdata/mosaic-spec": ">=0.18.0",
+    "@uwdata/mosaic-sql": ">=0.18.0",
+    "@uwdata/vgplot": ">=0.18.0",
+    "postcss": "^8.5.6",
+    "react": "^19.1.1",
+    "react-dom": "^19.1.1",
+    "svelte": "^5.37.3",
     "svelte-spa-router": "^4.0.1",
-    "tailwindcss": "^4.0.11",
-    "tslib": "^2.6.2",
-    "typescript": "^5.2.2",
-    "vite": "^6.1.0",
-    "vite-plugin-dts": "^4.3.0"
+    "tailwindcss": "^4.1.11",
+    "tslib": "^2.8.1",
+    "typescript": "^5.9.2",
+    "vite": "^7.0.6",
+    "vite-plugin-dts": "^4.5.4"
   }
 }

packages/table/package.json

@@ -32,12 +32,12 @@
     "svelte": "^5.0.0"
   },
   "devDependencies": {
-    "@types/lodash": "^4.17.15",
-    "publint": "^0.3.0",
-    "svelte": "^5.1.9",
-    "svelte-check": "^4.0.0",
-    "typescript": "^5.2.2",
-    "vite": "^6.1.0",
+    "@types/lodash": "^4.17.20",
+    "publint": "^0.3.12",
+    "svelte": "^5.37.3",
+    "svelte-check": "^4.3.1",
+    "typescript": "^5.9.2",
+    "vite": "^7.0.6",
     "lodash": "^4.17.21"
   }
 }

packages/viewer/package.json

@@ -28,39 +28,39 @@
     "@embedding-atlas/component": "*",
     "@embedding-atlas/table": "*",
     "@embedding-atlas/umap-wasm": "*",
-    "@huggingface/transformers": "^3.3.3",
-    "@iconify-json/fluent": "^1.2.4",
-    "@iconify-json/svg-spinners": "^1.1.2",
-    "@sveltejs/vite-plugin-svelte": "^5.0.0",
+    "@huggingface/transformers": "^3.7.1",
+    "@iconify-json/fluent": "^1.2.28",
+    "@iconify-json/svg-spinners": "^1.2.2",
+    "@sveltejs/vite-plugin-svelte": "^6.1.0",
     "@tailwindcss/forms": "^0.5.10",
-    "@tailwindcss/postcss": "^4.0.11",
-    "@tsconfig/svelte": "^5.0.2",
+    "@tailwindcss/postcss": "^4.1.11",
+    "@tsconfig/svelte": "^5.0.4",
     "@types/d3-array": "^3.2.1",
     "@types/d3-color": "^3.1.3",
     "@types/d3-format": "^3.0.4",
-    "@types/d3-scale": "^4.0.8",
-    "@types/d3-scale-chromatic": "^3.0.3",
+    "@types/d3-scale": "^4.0.9",
+    "@types/d3-scale-chromatic": "^3.1.0",
     "@types/mark.js": "^8.11.12",
     "d3-array": "^3.2.4",
     "d3-color": "^3.1.0",
     "d3-format": "^3.1.0",
     "d3-scale": "^4.0.2",
     "d3-scale-chromatic": "^3.1.0",
-    "flexsearch": "^0.8.161",
+    "flexsearch": "^0.8.205",
     "mark.js": "^8.11.1",
-    "marked": "^15.0.2",
-    "nanoid": "^5.0.9",
-    "postcss": "^8.4.38",
-    "prism-code-editor": "^4.0.0",
-    "publint": "^0.3.0",
-    "svelte": "^5.1.9",
+    "marked": "^16.1.2",
+    "nanoid": "^5.1.5",
+    "postcss": "^8.5.6",
+    "prism-code-editor": "^4.1.0",
+    "publint": "^0.3.12",
+    "svelte": "^5.37.3",
     "svelte-spa-router": "^4.0.1",
-    "tailwindcss": "^4.0.11",
-    "tslib": "^2.6.2",
-    "typescript": "^5.2.2",
-    "unplugin-icons": "^22.0.0",
-    "vite": "^6.1.0",
-    "vite-plugin-dts": "^4.3.0",
-    "vite-plugin-wasm": "^3.3.0"
+    "tailwindcss": "^4.1.11",
+    "tslib": "^2.8.1",
+    "typescript": "^5.9.2",
+    "unplugin-icons": "^22.2.0",
+    "vite": "^7.0.6",
+    "vite-plugin-dts": "^4.5.4",
+    "vite-plugin-wasm": "^3.5.0"
   }
 }