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mpwt 0.5.3

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@ArnaudBelcour ArnaudBelcour released this 09 Jan 14:37
v0.5.3
e35b2b7
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Learn about vigilant mode.

Add:

  • an option to create taxon_id.tsv files from GenBank and GFF (issue #35).
  • an option to use operon predictor of Pathway Tools (issue #33).
  • an option to avoid downloading PubMed entries using a parameter in ptools-init.dat (added in Pathway Tools 23.5). But it needs more testing and maybe modification in 0.5.4 (issue #34).
  • a test for to_pf using GenBank and GFF from test data (issue #30).
  • errors and warnings counts in log files.

Fix:

  • numerous issues with to_pf (issue #30). But this option needs more testing and modification in 0.5.4.
  • incompatibility with Pathway Tools 23.5.
  • typos in Readme.
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