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dock-postprocess v0.1.0
Initial public release of dock-postprocess.
Highlights:
- Standardized docking-workspace initialization with dock-init
- Native generalized OpenMM minimization
- Multichain receptor and ternary-complex support
- Configurable residue variants and metal restraints
- Post-minimization pose QC and optional focus-residue analysis
- Contact enrichment and interaction-landscape analysis
- Ligand conformational strain analysis
- Integrated master design table
- Stable L#### ligand identifiers and generalized results layout
The v0.1.0 workflow was regression-tested against the original validated p53/BRD4 workflow, including exact agreement in starting OpenMM potential energy for the minimizer validation case.
Some downstream analyses still use validated internal compatibility engines behind the generalized public interface.