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FitHiChIP_HiCPro - 1st release

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@ay-lab ay-lab released this 19 Oct 19:01
1.0
757bd1b

Software to analyze HiChIP data, by getting the statistical significant interactions using FitHiC.
The input paired end reads are provided from the HiC-Pro package.
The pipeline creates the interaction matrix, considers CIS interactions within a specified distance range, applies FitHIC on the raw contact count, and also generates filtered interactions using a bias correction method.

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