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v2.0.1

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@rpetit3 rpetit3 released this 03 Apr 03:08
· 37 commits to main since this release

2.0.1

Bug Fixes

  • Loosened dependency pins from ^ (caret) to >= to avoid artificial upper bounds that broke bioconda builds (e.g., pandas 3.x, rich 14.x)
  • Removed Nextflow runtime dependency from bactopia-datasets by reading conf/params.config directly instead of running nextflow config

Improvements

  • Extracted shared get_bactopia_version() helper in bactopia/nf.py, reused by bactopia-catalog