DIAMOND v2.2.5

• Improved the performance of the clustering workflows.
• Fixed a potential issue of increased memory use in the clustering workflows.
• Improved the performance of reading sequence files.
• Linear-time stages of the clustering workflows now by default use banded instead of full-matrix extension (set --ext full to use full-matrix extension instead).
• Added the option --reseek-diags to recompute diagonals prior to chaining.
• Added the options --reseek-xdrop to set ungapped x-drop, --word-threshold to set the word threshold in bits for k-mer neighbors and --double-hit-window to set the window for double hits when using --reseek-diags.
• Removed the --linclust-banded-ext and --lin-combo options.
• Fixed a potential inter-toolchain inconsistency in search workflows using sketching.
• Fixed a potential non-determinism in the clustering workflows.
• Fixed a bug causing invalid line breaks in the output file when using the qtitle output field with FASTQ files.