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ArnaudBoucher edited this page May 28, 2022 · 64 revisions

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1. clITK ?

clITK (for Command Line Insight Toolkit) is a toolbox for medical image processing and analysis. This set of solutions includes algorithms for pre-processing, segmentation, registration, analysis, evaluation of the results obtained as well as the VV visualization tool and more! This wiki presents you the installation steps of the tutorials for using these tools.

Contents

  1. clITK ?
  2. Pre-requisite sources and tools
  3. Download clITK
  4. Compiling clITK
  5. clITK tools Wiki and examples
  6. Create a new tool for clITK

2. Pre-requisite sources and tools

To use clitk, your system needs the following third party software (click on the link to get the download links a step by step installation instructions):

Other versions are compatible but not tested yet, we advise you to use the one indicated.

3. Download clITK

Create on your computer a folder “YOURclITKFOLDER”. Depending on your use of clITK there are 2 ways to download it:

  1. For users, simple download of the archive
  2. For contributors, use git to download and upload files)

For users Click on the link below: https://github.com/benpresles/vv Click on “Code” green button > “Download ZIP” clitk11

Uncompressed the vv-master.zip files in the folder “YOURclITKFOLDER\vv-master”

For contributors Click on the link below: https://github.com/benpresles/vv Click on “Code” green button and then click on the button next to the URL to copy it. clitk22

In your Git folder, launch “git-cmd.exe” clitk3

Go to “YOURclITKFOLDER” and enter the command “git clone” + paste the copied URL (https://github.com/benpresles/vv.git) > “press “Enter”. The clitkPoject is now in “YOURclITKFOLDER\vv”.

4. Compiling clITK

5. clITK tools Wiki and examples

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