MSA error #49
Description
Traceback (most recent call last):
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/infer_data_pipeline.py", line 211, in getitem
data, atom_array, _ = self.process_one(
^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/infer_data_pipeline.py", line 114, in process_one
InferenceMSAFeaturizer.make_msa_feature(
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_featurizer.py", line 1144, in make_msa_feature
msa_feats = InferenceMSAFeaturizer.get_inference_prot_msa_features_for_assembly(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_featurizer.py", line 1083, in get_inference_prot_msa_features_for_assembly
sequence_feat = InferenceMSAFeaturizer.process_prot_single_sequence(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_featurizer.py", line 969, in process_prot_single_sequence
sequence_features = process_single_sequence(
^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_featurizer.py", line 797, in process_single_sequence
msa_features = load_and_process_msa(
^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_utils.py", line 560, in load_and_process_msa
msa_data = parse_msa_data(
^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_utils.py", line 450, in parse_msa_data
return parse_prot_msa_data(raw_msa_paths, seq_limits)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/anaconda3/envs/PX3/lib/python3.11/site-packages/protenix/data/msa_utils.py", line 520, in parse_prot_msa_data
assert all([len(seq) == len(aligned_sequences[0]) for seq in aligned_sequences])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
AssertionError
不知道是怎么回事。其他蛋白没问题，这个蛋白不行