v0.0.19

What's Changed

• Typo: configuration docstring by @lamteteeow in #608
• Chore(deps): Update pytorch-lightning requirement from <=2.5.5,>=2.2 to >=2.2,<=2.5.6 by @dependabot[bot] in #609
• ci(pre-commit.ci): autoupdate by @pre-commit-ci[bot] in #603
• Chore(deps): Update pydantic requirement from <=2.12.3,>=2.11 to >=2.11,<=2.12.4 by @dependabot[bot] in #610
• Feature(Next-Gen Dataset): Lateral context patch construction for MicroSplit by @melisande-c in #612
• Chore(deps): Update torch requirement from <=2.9.0,>=2.0 to >=2.0,<=2.9.1 by @dependabot[bot] in #619
• Chore(deps): Update torchvision requirement from <=0.24.0 to <=0.24.1 by @dependabot[bot] in #618
• Feature(Next-Gen Dataset): MicroSplit Input and Target Generation (Proof of Principle) by @melisande-c in #617
• Feat: Enable Zarr CAREamics DataModule by @jdeschamps in #616
• Feat: Add prediction utilities and callbacks to NG Dataset by @jdeschamps in #620
• Refac(Next-Gen Dataset): Factory functions & Directory structure by @melisande-c in #624
• PN2V Lightning Draft by @CatEek in #557
• Refac: Rename test to pred in NG Dataset Config by @jdeschamps in #627
• Chore: update tests to prevent writing files outside of tmp folders by @jdeschamps in #628
• Feat(Next-Gen Dataset): Enable CZI by @jdeschamps in #629
• Chore: rename all configuration Pydantic models and reorganize modules by @jdeschamps in #623
• Chore(config): Add imports to __init__ by @jdeschamps in #633
• Feat(Next-Gen Dataset): return sources from convert_prediction in order by @jdeschamps in #631
• Feat(Next-Gen Dataset): enforce axes in CZI image stack loader by @jdeschamps in #635
• Feat(Next-Gen Dataset): allow selecting which channels to extract by @jdeschamps in #640
• Chore(Tests): rename test files by @jdeschamps in #641
• Chore(deps): Update pydantic requirement from <=2.12.4,>=2.11 to >=2.11,<=2.12.5 by @dependabot[bot] in #643
• Feat(Next-Gen Dataset): add in_memory parameter to configuration by @jdeschamps in #642
• ci(pre-commit.ci): autoupdate by @pre-commit-ci[bot] in #647
• Feat(Next-Gen Dataset): add mode parameter to NGDataConfig and add config conversion by @jdeschamps in #645
• Chore(deps): Update pytorch-lightning requirement from <=2.5.6,>=2.2 to >=2.2,<=2.6.0 by @dependabot[bot] in #646
• Chore(deps): Update matplotlib requirement from <=3.10.7 to <=3.10.8 by @dependabot[bot] in #656
• Chore(deps): Update tifffile requirement from <=2025.10.16 to <=2025.12.12 by @dependabot[bot] in #657
• Feat(Next-Gen Dataset): Better Zarr tile writing (prediction with S, sharding/chunking, error handling) by @jdeschamps in #653
• Chore(deps-dev): Update onnxscript requirement from <=0.5.6 to <=0.5.7 by @dependabot[bot] in #659
• Fix(Next-Gen Dataset): fix issue causing empty channels when predicting on channel subset by @jdeschamps in #661
• Chore(deps): Update tifffile requirement from <=2025.12.12 to <=2025.12.20 by @dependabot[bot] in #665
• Chore(deps): Update scikit-image requirement from <=0.25.2 to <=0.26.0 by @dependabot[bot] in #663
• Chore(deps): Update pillow requirement from <=12.0.0 to <=12.1.0 by @dependabot[bot] in #673
• ci(pre-commit.ci): autoupdate by @pre-commit-ci[bot] in #674
• Chore(deps): Update typer requirement from <=0.20.0,>=0.12.3 to >=0.12.3,<=0.21.1 by @dependabot[bot] in #675
• Chore(deps): Update psutil requirement from <=7.1.3 to <=7.2.1 by @dependabot[bot] in #670
• Feat(Next-Gen CAREamics): draft convenience functions for NG-compatible CAREamics (N2V only) by @jdeschamps in #662

New Contributors

• @lamteteeow made their first contribution in #608

Full Changelog: v0.0.18...v0.0.19