Sequential Fragments
In this new version of FragPELE we have solved some bugs presents in the very initial release and some new functions have been added.
Bugs solved:
- We erased the extra unnecessary growing step at the end of the simulation.
- The renaming system has been improved. Now allows sequential growing of fragments without any trouble.
News:
- Sequential growing completely implemented.
- Renaming. If you are not happy with the PDB atom names of your core, don't worry, you can rename them automatically with this function.
- Initial testing system. Now you can run pytest to ensure that everything is correct before starting to run FragPELE in an example.