Version 0.0.7

This release focuses on structural refactoring to improve codebase organization, specifically grouping morphology and integrator components into dedicated sub-packages (braincell.morph and braincell.quad).

Refactoring & Code Organization

• Morphology Sub-package (braincell.morph)

  • Moved and renamed morphology-related modules into braincell/morph/:
    • _morphology.py -> morph/_morphology.py
    • _morphology_branch_tree.py -> morph/_branch_tree.py
    • _morphology_from_asc.py -> morph/_from_asc.py
    • _morphology_from_swc.py -> morph/_from_swc.py
    • _morphology_utils.py -> morph/_utils.py

• Integrator Sub-package (braincell.quad)

  • Moved all integrator and solver modules into braincell/quad/:
    • _integrator*.py files moved to braincell/quad/.
  • This improves the clarity of the top-level namespace.

Documentation

• Structure Updates
  • Updated API documentation to reflect the new module structure.
  • Simplified index.rst and reorganized API reference pages.
  • Updated copyright to reflect membership in the BrainX Ecosystem.

CI/CD

• Workflow Updates
  • Bumped versions for actions/checkout, upload-artifact, and download-artifact.

What's Changed

• ⬆️ Bump actions/upload-artifact from 4 to 5 by @dependabot[bot] in #57
• ⬆️ Bump actions/download-artifact from 4 to 6 by @dependabot[bot] in #58
• ⬆️ Bump actions/checkout from 5 to 6 by @dependabot[bot] in #59
• ⬆️ Bump actions/upload-artifact from 5 to 6 by @dependabot[bot] in #60
• ⬆️ Bump actions/download-artifact from 6 to 7 by @dependabot[bot] in #61
• ⬆️ Bump styfle/cancel-workflow-action from 0.12.1 to 0.13.0 by @dependabot[bot] in #62
• Refactor morphology and integrators into morph/quad subpackages by @chaoming0625 in #63

Full Changelog: v0.0.6...v0.0.7