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v1.14.0

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@cokelaer cokelaer released this 09 Mar 12:22
· 88 commits to main since this release

What's Changed

  • Overhaul PubChem module to cover PUG REST API comprehensively by @Copilot in #299
  • Fix savePathwayAs by switching to WikiPathways static assets URL by @Copilot in #302
  • Simplify BioGRID: remove intermediary Search class by @Copilot in #303
  • [WIP] Fix circular import issue with uniprot by @Copilot in #304
  • Fix ReadTheDocs build: remove failing sphinxcontrib-googleanalytics, enable sphinx_copybutton by @Copilot in #306
  • Fix CI: install pytest via [project.optional-dependencies] by @Copilot in #308
  • Fix eutils tests failing on Python 3.11/3.12 due to numpy fork incompatibility by @Copilot in #309
  • Fix PRIDE CI failures: handle new list-based API responses and stats 404 by @Copilot in #310
  • Fix Python 3.11/3.12 CI regression: pin numpy <2.4 by @Copilot in #313
  • Add EBI Proteins API service by @Copilot in #314
  • Fix parse_kgml_pathway: missing graphics crash, silent relation drops, and sub-pathway docs by @Copilot in #316

Full Changelog: v0.13.0...v1.14.0