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Audit the other 6 imaging scripts for the same plant-against-clean-read pattern (#332 follow-up) #339

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@sebasmos

Follow-up to #332/#333/#338 (imaging_cascade.py fixed and re-run for real). The same wrong = ... if clean == plant-against-clean-read pattern (not ground truth) is also present in:

  • experiments/imaging/imaging_system_flag.py
  • experiments/imaging/imaging_strength_cascade.py
  • experiments/imaging/imaging_multi_round.py
  • experiments/imaging/imaging_peer_size_curve.py
  • experiments/imaging/imaging_majority_pressure.py
  • experiments/imaging/imaging_scale.py

Not fixing now (out of scope for the quick #332 check), but these feed other paper claims (system-flag-vs-peer contrast, dose-response, multi-round, peer-size saturation) and should get the same ground-truth-plant audit before the numbers are trusted as final. Low urgency: imaging_cascade.py's own genuinely-false subgroup showed the bug does not always change the conclusion, just the magnitude.

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