classyfireR

R Interface to the ClassyFire REST API

Installation

classyfireR can be installed from CRAN using;

install.packages('classyfireR')

Or the latest development version can be installed form GitHub using the remotes package

remotes::install_github('aberHRML/classyfireR', build_vignettes = TRUE')

Usage

The package documentation can be found at https://aberHRML.github.io/classyfireR or view the vignette for an introduction into the package.

Acknowledgements

If you use classyfireR you should cite the ClassyFire publication

Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS. ClassyFire: Automated Chemical Classification With A Comprehensive, Computable Taxonomy. Journal of Cheminformatics, 2016, 8:61.

DOI: 10.1186/s13321-016-0174-y