Releases: ebi-gene-expression-group/atlas-anndata
Releases · ebi-gene-expression-group/atlas-anndata
v0.1.9
(note: this will be the last release by @pinin4fjords prior to departure)
What's Changed
- Make sure parameter is a string when adding to manifest by @pinin4fjords in #37
- Try to make sure altered object is readable by @pinin4fjords in #38
Full Changelog: v0.1.8...v0.1.9
v0.1.8
What's Changed
- Fix unsupervised cluster renumbering by @pinin4fjords in #36
Full Changelog: v0.1.7...v0.1.8
v0.1.7
v0.1.6
What's Changed
- Don't use raw matrix for marker calculation unless appropriate, use load_to_scxa_db matrix by default. by @pinin4fjords in #32
- Remove single groups from marker detection by @pinin4fjords in #33
- Sanitise fields to be used for marker detection to avoid HDF5 write errors by @pinin4fjords in #34
Full Changelog: v0.1.5...v0.1.6
v0.1.5
What's Changed
- Fix a sample_field reference in non-droplet context by @pinin4fjords in #31
Full Changelog: v0.1.4...v0.1.5
v0.1.4
What's Changed
- Make sure stats for unsupervised clusterings are recorded correctly by @pinin4fjords in #29
Full Changelog: v0.1.3...v0.1.4
v0.1.3
What's Changed
- Update README.md by @pinin4fjords in #27
- More efficiency measures for marker stats table calc by @pinin4fjords in #28
Full Changelog: v0.1.2...v0.1.3
v0.1.1
What's Changed
- Make summary stats calculation for efficient by @pinin4fjords in #25
- Simplify setup to faciliate a conda wrapper by @pinin4fjords in #26
Full Changelog: v0.1.0...v0.1.1
v0.1.0
v0.0.2
What's Changed
- clustering obs must be categorical by @pinin4fjords in #21
- Bump atlas-expeiriment-metadata version used in Snakemake workflow by @pinin4fjords in #22
- Simplify workflow and allow operations based on curated metadata by @pinin4fjords in #23
Full Changelog: v0.0.1...v0.0.2