mito-overview v0.2.1
This release supports the free-format workflow/resource manuscript draft for mito-overview.
Release identifiers
- Tag:
v0.2.1 - Tagged merge commit:
2ba62b775a7204c0dc61f5408989603f536c78da - Merged PR: #1
- GitHub Actions smoke-test run: https://github.com/elissonnog/mito-overview/actions/runs/28883502145
Scope
This release supports a bounded software/resource claim: reproducible, mode-gated mtDNA reporting from aligned sequencing data with long-read-oriented evidence layers and an auxiliary reduced short-read compatibility path. It is not a clinical diagnostic validation, calibrated low-VAF benchmark, deletion-truth benchmark, pathogenicity classifier, formal NUMT classifier, or mtDNA methylation biology claim.
Validation summary
Passed checks include:
python -m mito_overview.cli --list-stepspython -m mito_overview.cli --config examples/configs/human_example.env --dry-run- synthetic long-read smoke workflow
- synthetic reduced short-read smoke workflow
- long-read no-methylation smoke workflow
- local release-candidate validation packet with output inventories and checksums
- fresh clone from the pushed
v0.2.1tag followed by CLI, dry-run, and all three smoke workflows
The public GM11906 reduced short-read proof-of-principle rerun reproduced the marker-level m.8344A>G representation reported in the manuscript draft. The full public GM12878 ONT FASTQ rerun remains deferred for the release gate because the source FASTQ is approximately 1.9 GB before alignment; the tracked public long-read asset pack remains included for workflow-output inspection.
Manuscript artifacts
The release assets include an inspectable DOCX and PDF export of the free-format manuscript draft. The canonical manuscript source remains paper/preprint_draft.md in the repository.
External archive
A Zenodo DOI or Software Heritage identifier has not yet been assigned. This GitHub tag archive is the versioned source reference until an external archive identifier is minted.